WormBase Tree Display for Gene: WBGene00021933
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WBGene00021933 | SMap | S_parent | Sequence | Y55F3AR | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y55F3AR.2 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_Y55F3AR.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y55F3AR.2 | ||||||||
DB_info | Database | AceView | gene | 4B849 | |||||
WormQTL | gene | WBGene00021933 | |||||||
WormFlux | gene | WBGene00021933 | |||||||
NDB | locus_tag | CELE_Y55F3AR.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021933|UniProtKB=Q9N357 | |||||||
family | PTHR46115 | ||||||||
NCBI | gene | 176929 | |||||||
RefSeq | protein | NM_067635.5 | |||||||
TREEFAM | TREEFAM_ID | TF314399 | |||||||
TrEMBL | UniProtAcc | Q9N357 | |||||||
UniProt_GCRP | UniProtAcc | Q9N357 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (59) | |||||||||
Strain | WBStrain00036462 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00093489 | ||||||||
00093490 | |||||||||
00093491 | |||||||||
Contained_in_operon | CEOP4048 | ||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00021826 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00007099 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00015062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020917 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021548 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable protein-disulfide reductase activity. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in male infertility. Is an ortholog of human TXNDC8 (thioredoxin domain containing 8). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:12336 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:31454) | ||||
Molecular_info | Corresponding_CDS | Y55F3AR.2 | |||||||
Corresponding_CDS_history | Y55F3AR.2:wp102 | ||||||||
Corresponding_transcript | Y55F3AR.2.1 | ||||||||
Other_sequence | CJC14392_1 | ||||||||
CRC03424_1 | |||||||||
PPC09230_1 | |||||||||
PTC00266_1 | |||||||||
CR06495 | |||||||||
CBC04257_1 | |||||||||
PT00062 | |||||||||
CRC11559_1 | |||||||||
Associated_feature (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00037523 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057537 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025560 | ||||||||
Expr1039645 | |||||||||
Expr1160971 | |||||||||
Expr2007986 | |||||||||
Expr2026228 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (83) | |||||||||
Interaction | WBInteraction000046328 | ||||||||
WBInteraction000216183 | |||||||||
WBInteraction000328612 | |||||||||
WBInteraction000363555 | |||||||||
WBInteraction000462274 | |||||||||
WBInteraction000469764 | |||||||||
WBInteraction000473139 | |||||||||
WBInteraction000559649 | |||||||||
WBInteraction000570921 | |||||||||
WBInteraction000585654 | |||||||||
Map_info | Positive | Positive_clone | Y55F3AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -22.0932 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00041408 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |