WormBase Tree Display for Gene: WBGene00021698
expand all nodes | collapse all nodes | view schema
| WBGene00021698 | SMap | S_parent | Sequence | Y48G9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | frl-1 | Person_evidence | WBPerson314 | |||||
| WBPerson3089 | |||||||||
| Sequence_name | Y48G9A.4 | ||||||||
| Molecular_name | Y48G9A.4a | ||||||||
| Y48G9A.4a.1 | |||||||||
| CE32979 | |||||||||
| Y48G9A.4b | |||||||||
| CE54251 | |||||||||
| Y48G9A.4b.1 | |||||||||
| Other_name | CELE_Y48G9A.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | frl-1 | ||||||||
| DB_info | Database | AceView | gene | 3D239 | |||||
| WormQTL | gene | WBGene00021698 | |||||||
| WormFlux | gene | WBGene00021698 | |||||||
| NDB | locus_tag | CELE_Y48G9A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021698|UniProtKB=Q9BL72 | |||||||
| family | PTHR45857 | ||||||||
| NCBI | gene | 175346 | |||||||
| RefSeq | protein | NM_001393294.1 | |||||||
| NM_065104.8 | |||||||||
| TrEMBL | UniProtAcc | A0A7R9SVK3 | |||||||
| Q9BL72 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A7R9SVK3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Jun 2006 11:43:04 | WBPerson2970 | Name_change | CGC_name | frl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frl | ||||||||
| Allele (764) | |||||||||
| Strain | WBStrain00002873 | ||||||||
| WBStrain00031434 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00125951 | ||||||||
| 00125952 | |||||||||
| 00125953 | |||||||||
| 00125954 | |||||||||
| 00125955 | |||||||||
| 00125956 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00010453 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00000872 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008848 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016735 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018976 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019030 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021473 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | frl-1 encodes a homolog of human FMNL1 (also known as human leukocyteformin) and FMNL2-3, and a paralog of human DAAM1-2; FRL-1 enablesWnt-directed planar cell polarity; FRL-1 is required for the fullyasymmetrical division of B.a versus B.p cells, though this requirement isquantitatively weak. | Paper_evidence | WBPaper00027345 | |||||
| WBPaper00028594 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 25 Oct 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable actin binding activity and small GTPase binding activity. Predicted to be involved in actin cytoskeleton organization and regulation of cell morphogenesis. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G9A.4a | |||||||
| Y48G9A.4b | |||||||||
| Corresponding_CDS_history | Y48G9A.4:wp91 | ||||||||
| Corresponding_transcript | Y48G9A.4a.1 | ||||||||
| Y48G9A.4b.1 | |||||||||
| Other_sequence (42) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00078118 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056983 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1303 | ||||||||
| Expr7014 | |||||||||
| Expr1018548 | |||||||||
| Expr1039505 | |||||||||
| Expr1160429 | |||||||||
| Expr2011881 | |||||||||
| Expr2030119 | |||||||||
| Drives_construct | WBCnstr00003393 | ||||||||
| Antibody | WBAntibody00002374 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (80) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | III | Position | -15.1474 | Error | 0.053163 | |||
| Positive | Positive_clone | Y48G9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033015 | ||||||||
| WBPaper00033734 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041258 | |||||||||
| WBPaper00042764 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060525 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
