WormBase Tree Display for Gene: WBGene00021594
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| WBGene00021594 | SMap | S_parent | Sequence | Y46E12BL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tig-3 | Person_evidence | WBPerson465 | |||||
| Sequence_name | Y46E12BL.1 | ||||||||
| Molecular_name | Y46E12BL.1a | ||||||||
| Y46E12BL.1a.1 | |||||||||
| CE39847 | |||||||||
| Y46E12BL.1b | |||||||||
| CE54439 | |||||||||
| Y46E12BL.1b.1 | |||||||||
| Other_name | CELE_Y46E12BL.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | tig-3 | ||||||||
| DB_info | Database | AceView | gene | 2P528 | |||||
| WormQTL | gene | WBGene00021594 | |||||||
| WormFlux | gene | WBGene00021594 | |||||||
| NDB | locus_tag | CELE_Y46E12BL.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021594|UniProtKB=Q965N9 | |||||||
| family | PTHR11848 | ||||||||
| NCBI | gene | 266879 | |||||||
| RefSeq | protein | NM_064917.6 | |||||||
| NM_001404267.1 | |||||||||
| TrEMBL | UniProtAcc | Q965N9 | |||||||
| A0A8S4QGI4 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A8S4QGI4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Jun 2006 16:28:50 | WBPerson2970 | Name_change | CGC_name | tig-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tig | ||||||||
| Allele (157) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090515 | ||||||||
| 00090516 | |||||||||
| 00090517 | |||||||||
| 00090518 | |||||||||
| 00090519 | |||||||||
| 00090520 | |||||||||
| 00125890 | |||||||||
| 00125891 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00000903 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000936 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006570 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006852 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | tig-3 encodes a predicted transforming growth factor beta homolog. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 18 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable cytokine activity. Predicted to be involved in signal transduction. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46E12BL.1a | |||||||
| Y46E12BL.1b | |||||||||
| Corresponding_CDS_history | Y46E12BL.1:wp154 | ||||||||
| Corresponding_transcript | Y46E12BL.1a.1 | ||||||||
| Y46E12BL.1b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056662 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1020642 | ||||||||
| Expr1160134 | |||||||||
| Expr2017399 | |||||||||
| Expr2035538 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction | WBInteraction000578884 | ||||||||
| WBProcess | WBbiopr:00000025 | ||||||||
| Map_info | Map | II | Position | 24.6727 | |||||
| Positive | Positive_clone | Y46E12BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027307 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00061307 | |||||||||
| WBPaper00061718 | |||||||||
| WBPaper00064099 | |||||||||
| WBPaper00064756 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
