WormBase Tree Display for Gene: WBGene00020516
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WBGene00020516 | SMap | S_parent | Sequence | T15B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | T15B7.1 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_T15B7.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | T15B7.1 | ||||||||
DB_info | Database | AceView | gene | 5H327 | |||||
WormQTL | gene | WBGene00020516 | |||||||
WormFlux | gene | WBGene00020516 | |||||||
NDB | locus_tag | CELE_T15B7.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020516|UniProtKB=Q5ZR75 | |||||||
family | PTHR19143 | ||||||||
NCBI | gene | 188512 | |||||||
RefSeq | protein | NM_072342.6 | |||||||
TrEMBL | UniProtAcc | Q5ZR75 | |||||||
UniProt_GCRP | UniProtAcc | Q5ZR75 | |||||||
OMIM | gene | 604973 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Nov 2004 15:51:45 | WBPerson2970 | Event | Acquires_merge | WBGene00020521 | ||||
Acquires_merge | WBGene00020521 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (57) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (2) | |||||||||
Ortholog (76) | |||||||||
Paralog | WBGene00017013 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002915 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00007687 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011326 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be located in collagen-containing extracellular matrix and extracellular space. Is an ortholog of several human genes including FCN1 (ficolin 1); FCN2 (ficolin 2); and MFAP4 (microfibril associated protein 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | EFO:MONDO:0044209 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3625) | ||||
Molecular_info | Corresponding_CDS | T15B7.1 | |||||||
Corresponding_CDS_history | T15B7.1:wp131 | ||||||||
T15B7.1:wp202 | |||||||||
Corresponding_transcript | T15B7.1.1 | ||||||||
Other_sequence | Hbac_isotig02250 | ||||||||
Oden_isotig24882 | |||||||||
EX914609.1 | |||||||||
CBC09366_1 | |||||||||
HBC22060_1 | |||||||||
Associated_feature | WBsf1000373 | ||||||||
WBsf231917 | |||||||||
WBsf231918 | |||||||||
WBsf231919 | |||||||||
WBsf231920 | |||||||||
Experimental_info | RNAi_result | WBRNAi00018744 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053362 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053353 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103533 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035584 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053371 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018733 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095073 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021779 | ||||||||
Expr1156936 | |||||||||
Expr2006192 | |||||||||
Expr2024408 | |||||||||
Drives_construct | WBCnstr00025082 | ||||||||
Construct_product | WBCnstr00025082 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (256) | |||||||||
Interaction (121) | |||||||||
Map_info | Positive | Positive_clone | T15B7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 0.343991 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |