WormBase Tree Display for Gene: WBGene00020211
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| WBGene00020211 | SMap | S_parent | Sequence | T04C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T04C9.3 | |||||||
| Molecular_name | T04C9.3 | ||||||||
| T04C9.3.1 | |||||||||
| CE04878 | |||||||||
| Other_name | CELE_T04C9.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T04C9.3 | ||||||||
| DB_info | Database | AceView | gene | 3H77 | |||||
| WormQTL | gene | WBGene00020211 | |||||||
| WormFlux | gene | WBGene00020211 | |||||||
| NDB | locus_tag | CELE_T04C9.3 | |||||||
| NCBI | gene | 188055 | |||||||
| RefSeq | protein | NM_065903.1 | |||||||
| TrEMBL | UniProtAcc | Q9GP92 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GP92 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01944680 | ||||||||
| WBVar01500260 | |||||||||
| WBVar01990108 | |||||||||
| WBVar01500122 | |||||||||
| WBVar01500123 | |||||||||
| WBVar01999634 | |||||||||
| WBVar02018854 | |||||||||
| WBVar02069616 | |||||||||
| WBVar02011530 | |||||||||
| WBVar01952212 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Automated_description | Enriched in AFD and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-12; hpl-2; and egl-43 based on microarray; tiling array; and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04C9.3 | |||||||
| Corresponding_transcript | T04C9.3.1 | ||||||||
| Other_sequence | JI474788.1 | ||||||||
| JI254420.1 | |||||||||
| PPC04958 | |||||||||
| FG351729.1 | |||||||||
| JI256749.1 | |||||||||
| JI471203.1 | |||||||||
| Tcir_isotig18318 | |||||||||
| BMC01912_1 | |||||||||
| GO250360.1 | |||||||||
| Associated_feature | WBsf992598 | ||||||||
| WBsf992599 | |||||||||
| WBsf992600 | |||||||||
| WBsf1014996 | |||||||||
| WBsf1014997 | |||||||||
| WBsf1014998 | |||||||||
| WBsf1014999 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018137 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052379 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005743 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078385 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021499 | ||||||||
| Expr1156007 | |||||||||
| Drives_construct | WBCnstr00025296 | ||||||||
| Construct_product | WBCnstr00025296 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster | WBPaper00037624:ets-4(ok165)_downregulated | ||||||||
| WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray | |||||||||
| WBPaper00040221:DAF-12_target_ALF4 | |||||||||
| WBPaper00040560:hpl-2_embryo_downregulated | |||||||||
| WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | |||||||||
| WBPaper00050344:AFD-neuron_enriched | |||||||||
| WBPaper00059471:EGL-43_interacting | |||||||||
| WBPaper00025099:NI_specific | |||||||||
| WBPaper00026980:intestine_enriched | |||||||||
| Interaction | WBInteraction000050735 | ||||||||
| WBInteraction000266355 | |||||||||
| WBInteraction000297371 | |||||||||
| WBInteraction000331002 | |||||||||
| WBInteraction000332210 | |||||||||
| WBInteraction000434482 | |||||||||
| WBInteraction000456535 | |||||||||
| Map_info | Positive | Positive_clone | T04C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.4275 | |||||||
| Method | Gene |
