WormBase Tree Display for Gene: WBGene00020094
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WBGene00020094 | SMap | S_parent | Sequence | R144 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | wip | ||||||
Allele (34) | |||||||
Strain (2) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00022028 | ||||||
00022029 | |||||||
00022030 | |||||||
00022031 | |||||||
00124805 | |||||||
Contained_in_operon | CEOP3256 | ||||||
Ortholog (33) | |||||||
Paralog | WBGene00006957 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00007840 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00015100 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00015107 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00011978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | wip-1 encodes the C. elegans ortholog of WASP-interacting protein; wip-1 is required for embryonic morphogenesis, specifically ventral enclosure; WIP-1 is predicted to bind G-actin and in a yeast two-hybrid assay WIP-1 physically interacts with WSP-1, the C. elegans WASP ortholog; WIP-1 and WSP-1 are mutually required for normal protein levels; WIP-1 is broadly expressed in the embryo and is found in migrating hypodermal cells during ventral enclosure. | Paper_evidence | WBPaper00027006 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 29 May 2013 00:00:00 | ||||||
Automated_description | Enables cytoskeletal regulatory protein binding activity. Involved in embryonic body morphogenesis; regulation of cell migration; and regulation of protein stability. Expressed in hypodermis. Is an ortholog of human WIPF1 (WAS/WASL interacting protein family member 1); WIPF2 (WAS/WASL interacting protein family member 2); and WIPF3 (WAS/WASL interacting protein family member 3). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R144.4a | |||||
R144.4b | |||||||
Corresponding_CDS_history | R144.4a:wp102 | ||||||
R144.4b:wp102 | |||||||
Corresponding_transcript | R144.4a.1 | ||||||
R144.4b.1 | |||||||
Other_sequence | AS00801 | ||||||
CRC00425_1 | |||||||
NB08701 | |||||||
CBC02684_1 | |||||||
NBC07295_1 | |||||||
Tcol_contig19598 | |||||||
JO475789.1 | |||||||
ASC23400_1 | |||||||
Associated_feature | WBsf981465 | ||||||
WBsf992270 | |||||||
WBsf992271 | |||||||
WBsf1014827 | |||||||
WBsf1014828 | |||||||
WBsf224836 | |||||||
WBsf224837 | |||||||
Experimental_info | RNAi_result (24) | ||||||
Expr_pattern | Expr4343 | ||||||
Expr1019444 | |||||||
Expr1038733 | |||||||
Expr1155604 | |||||||
Expr1200206 | |||||||
Expr2018069 | |||||||
Expr2036207 | |||||||
Drives_construct | WBCnstr00025376 | ||||||
Construct_product | WBCnstr00025376 | ||||||
Antibody | WBAntibody00001047 | ||||||
Microarray_results (31) | |||||||
Expression_cluster (106) | |||||||
Interaction (63) | |||||||
Map_info | Map | III | Position | -2.22895 | Error | 0.003422 | |
Positive | Positive_clone | R144 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027006 | ||||||
WBPaper00031805 | |||||||
WBPaper00038491 | |||||||
WBPaper00040857 | |||||||
WBPaper00055090 | |||||||
WBPaper00056797 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |