WormBase Tree Display for Gene: WBGene00020094
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WBGene00020094 | SMap | S_parent | Sequence | R144 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | wip-1 | Person_evidence | WBPerson1949 | |||||
Sequence_name | R144.4 | ||||||||
Molecular_name | R144.4a | ||||||||
R144.4a.1 | |||||||||
CE34587 | |||||||||
R144.4b | |||||||||
CE34588 | |||||||||
R144.4b.1 | |||||||||
Other_name | CELE_R144.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | wip-1 | ||||||||
DB_info | Database | AceView | gene | 3G109 | |||||
WormQTL | gene | WBGene00020094 | |||||||
WormFlux | gene | WBGene00020094 | |||||||
NDB | locus_tag | CELE_R144.4 | |||||||
NCBI | gene | 175681 | |||||||
RefSeq | protein | NM_171863.4 | |||||||
NM_171109.4 | |||||||||
TrEMBL | UniProtAcc | Q8WT46 | |||||||
H2KZ22 | |||||||||
UniProt_GCRP | UniProtAcc | Q8WT46 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Mar 2006 08:13:40 | WBPerson2970 | Name_change | CGC_name | wip-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | wip | ||||||||
Allele (34) | |||||||||
Strain (2) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022028 | ||||||||
00022029 | |||||||||
00022030 | |||||||||
00022031 | |||||||||
00124805 | |||||||||
Contained_in_operon | CEOP3256 | ||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00006957 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00007840 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00015100 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00015107 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | wip-1 encodes the C. elegans ortholog of WASP-interacting protein; wip-1 is required for embryonic morphogenesis, specifically ventral enclosure; WIP-1 is predicted to bind G-actin and in a yeast two-hybrid assay WIP-1 physically interacts with WSP-1, the C. elegans WASP ortholog; WIP-1 and WSP-1 are mutually required for normal protein levels; WIP-1 is broadly expressed in the embryo and is found in migrating hypodermal cells during ventral enclosure. | Paper_evidence | WBPaper00027006 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 29 May 2013 00:00:00 | ||||||||
Automated_description | Enables cytoskeletal regulatory protein binding activity. Involved in embryonic body morphogenesis; regulation of cell migration; and regulation of protein stability. Expressed in hypodermis. Is an ortholog of human WIPF1 (WAS/WASL interacting protein family member 1); WIPF2 (WAS/WASL interacting protein family member 2); and WIPF3 (WAS/WASL interacting protein family member 3). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R144.4a | |||||||
R144.4b | |||||||||
Corresponding_CDS_history | R144.4a:wp102 | ||||||||
R144.4b:wp102 | |||||||||
Corresponding_transcript | R144.4a.1 | ||||||||
R144.4b.1 | |||||||||
Other_sequence | AS00801 | ||||||||
CRC00425_1 | |||||||||
NB08701 | |||||||||
CBC02684_1 | |||||||||
NBC07295_1 | |||||||||
Tcol_contig19598 | |||||||||
JO475789.1 | |||||||||
ASC23400_1 | |||||||||
Associated_feature | WBsf981465 | ||||||||
WBsf992270 | |||||||||
WBsf992271 | |||||||||
WBsf1014827 | |||||||||
WBsf1014828 | |||||||||
WBsf224836 | |||||||||
WBsf224837 | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern (7) | |||||||||
Drives_construct | WBCnstr00025376 | ||||||||
Construct_product | WBCnstr00025376 | ||||||||
Antibody | WBAntibody00001047 | ||||||||
Microarray_results (31) | |||||||||
Expression_cluster (106) | |||||||||
Interaction (63) | |||||||||
Map_info | Map | III | Position | -2.22895 | Error | 0.003422 | |||
Positive | Positive_clone | R144 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027006 | ||||||||
WBPaper00031805 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040857 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056797 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |