WormBase Tree Display for Gene: WBGene00019608
expand all nodes | collapse all nodes | view schema
| WBGene00019608 | SMap | S_parent | Sequence | K10B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ani-2 | Person_evidence | WBPerson1816 | |||||
| WBPerson1836 | |||||||||
| Sequence_name | K10B2.5 | ||||||||
| Molecular_name | K10B2.5 | ||||||||
| K10B2.5.1 | |||||||||
| CE02012 | |||||||||
| Other_name | tag-221 | Curator_confirmed | WBPerson2970 | ||||||
| CELE_K10B2.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | ani-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Nov 2004 11:05:03 | WBPerson2970 | Name_change | CGC_name | ani-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ani | ||||||||
| Allele (51) | |||||||||
| Strain | WBStrain00035994 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP2244 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00007409 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012835 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013038 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ani-2 encodes one of three C. elegans anillins; ANI-2 activity is required in the syncytial gonad for proper gonad structure and oocyte formation; specifically, ANI-2 appears to be required for maintaining the structure of the rachis, the syncytial compartment of germline cytoplasm that connects developing ooctyes; in the adult gonad, ANI-2 localizes to the surface of the rachis. | Paper_evidence | WBPaper00025229 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Nov 2007 00:00:00 | ||||||||
| Automated_description | Involved in several processes, including female gamete generation; gonad development; and syncytium formation. Located in cytoplasm. Expressed in germ line. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis 8. Is an ortholog of human ANLN (anillin, actin binding protein). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111133 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14082) | ||||
| Molecular_info | Corresponding_CDS | K10B2.5 | |||||||
| Corresponding_transcript | K10B2.5.1 | ||||||||
| Other_sequence | CR04952 | ||||||||
| CBC17633_1 | |||||||||
| CBC01419_1 | |||||||||
| CRC03165_1 | |||||||||
| CBC08095_1 | |||||||||
| CGC00761_1 | |||||||||
| CBC00636_1 | |||||||||
| CBC04982_1 | |||||||||
| CJC06779_1 | |||||||||
| CGC01113_1 | |||||||||
| Associated_feature | WBsf650141 | ||||||||
| WBsf665604 | |||||||||
| WBsf223168 | |||||||||
| WBsf223169 | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr3281 | ||||||||
| Expr1012967 | |||||||||
| Expr1038467 | |||||||||
| Expr1154185 | |||||||||
| Expr2009336 | |||||||||
| Expr2027572 | |||||||||
| Drives_construct | WBCnstr00025732 | ||||||||
| Construct_product | WBCnstr00019412 | ||||||||
| WBCnstr00025732 | |||||||||
| Antibody | WBAntibody00000928 | ||||||||
| WBAntibody00002425 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction (148) | |||||||||
| Map_info | Map | II | Position | -0.380478 | Error | 0.000395 | |||
| Positive | Positive_clone | K10B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5272 | |||||||
| Pseudo_map_position | |||||||||
| Reference (21) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
