WormBase Tree Display for Gene: WBGene00019159
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WBGene00019159 | SMap | S_parent | Sequence | H05C05 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | ||||||||
Name | Sequence_name | H05C05.3 | ||||||||
Molecular_name | H05C05.3 | |||||||||
Other_name | CELE_H05C05.3 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | H05C05.3 | |||||||||
DB_info | Database | AceView | gene | 3E56 | ||||||
WormQTL | gene | WBGene00019159 | ||||||||
WormFlux | gene | WBGene00019159 | ||||||||
NDB | locus_tag | CELE_H05C05.3 | ||||||||
NCBI | gene | 186695 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 20 Jan 2020 12:18:24 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Allele (44) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00069405 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WBGene00162719 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
WBGene00127143 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
WBGene00083034 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
Paralog (12) | ||||||||||
Structured_description | Automated_description | Enriched in intestine based on microarray studies. Is affected by several genes including clk-1; pgl-1; and lin-35 based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | H05C05.3:wp275 | ||||||||
Corresponding_pseudogene | H05C05.3 | |||||||||
Associated_feature | WBsf991639 | |||||||||
WBsf1014493 | ||||||||||
Experimental_info | Expr_pattern | Expr1011807 | ||||||||
Expr1153045 | ||||||||||
Expr2022748 | ||||||||||
Microarray_results (19) | ||||||||||
Expression_cluster (35) | ||||||||||
Interaction | WBInteraction000218606 | |||||||||
WBInteraction000247254 | ||||||||||
WBInteraction000255653 | ||||||||||
WBInteraction000303071 | ||||||||||
WBInteraction000353478 | ||||||||||
WBInteraction000412932 | ||||||||||
WBInteraction000420743 | ||||||||||
Map_info | Positive | Positive_clone | H05C05 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Interpolated_map_position | III | -8.30164 | ||||||||
Method | Gene |