WormBase Tree Display for Gene: WBGene00018671
expand all nodes | collapse all nodes | view schema
| WBGene00018671 | SMap | S_parent | Sequence | F52C6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F52C6.14 | ||||||||
| Molecular_name | F52C6.14 | |||||||||
| Other_name | F52C6.a | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | |||||||||
| F52C6.b | Curator_confirmed | WBPerson1983 | ||||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | |||||||||
| CELE_F52C6.14 | Accession_evidence | NDB | BX284602 | |||||||
| Public_name | F52C6.14 | |||||||||
| DB_info | Database | AceView | gene | 2C224 | ||||||
| WormQTL | gene | WBGene00018671 | ||||||||
| WormFlux | gene | WBGene00018671 | ||||||||
| NDB | locus_tag | CELE_F52C6.14 | ||||||||
| NCBI | gene | 186096 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Nov 2019 15:06:36 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (81) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00069405 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00162719 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00127143 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00083034 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (12) | ||||||||||
| Structured_description | Automated_description | Enriched in germ line and neurons based on RNA-seq studies. Is affected by several genes including eat-2; pgl-1; and csr-1 based on RNA-seq studies. Is affected by eight chemicals including aldicarb; multi-walled carbon nanotube; and Alovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F52C6.14:wp274 | ||||||||
| Corresponding_pseudogene | F52C6.14 | |||||||||
| Associated_feature | WBsf665371 | |||||||||
| WBsf665372 | ||||||||||
| WBsf665373 | ||||||||||
| WBsf665374 | ||||||||||
| Experimental_info | Expr_pattern | Expr1028440 | ||||||||
| Expr1151765 | ||||||||||
| Expr2003980 | ||||||||||
| Expr2022201 | ||||||||||
| Drives_construct | WBCnstr00026346 | |||||||||
| Construct_product | WBCnstr00026346 | |||||||||
| Microarray_results (16) | ||||||||||
| Expression_cluster (48) | ||||||||||
| Interaction (273) | ||||||||||
| Map_info | Positive | Positive_clone | F52C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -14.1206 | ||||||||
| Method | Gene |
