WormBase Tree Display for Sequence: F52C6
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| F52C6 | DNA | F52C6 | 27961 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (14) | ||||
| CDS_child (291) | ||||||
| Transcript | F52C6.10.1 | 14430 | 13200 | |||
| F52C6.11.1 | 16077 | 14745 | ||||
| F52C6.2.1 | 19774 | 20659 | ||||
| F52C6.3.1 | 18071 | 19032 | ||||
| F52C6.4.1 | 16449 | 17313 | ||||
| F52C6.4.2 | 16449 | 17312 | ||||
| F52C6.4.3 | 16459 | 17313 | ||||
| F52C6.6.1 | 6153 | 5762 | ||||
| F52C6.8.1 | 11274 | 10025 | ||||
| Pseudogene | F52C6.1 | 21191 | 22046 | |||
| F52C6.5 | 1473 | 3047 | ||||
| F52C6.7 | 9688 | 6917 | ||||
| F52C6.9 | 12751 | 11631 | ||||
| F52C6.12 | 23395 | 22463 | ||||
| F52C6.13 | 23708 | 23493 | ||||
| F52C6.14 | 27819 | 24455 | ||||
| PCR_product (58) | ||||||
| Allele (1063) | ||||||
| Oligo_set (14) | ||||||
| Feature_object (141) | ||||||
| Feature_data | F52C6:Polysome | 1 | 27961 | |||
| F52C6:TranscriptionallyActiveRegion | 1 | 27961 | ||||
| F52C6:ChIPSeqTF | 1 | 27961 | ||||
| F52C6:TRF | 1 | 27961 | ||||
| F52C6:Dust | 1 | 27961 | ||||
| F52C6:inverted | 1 | 27961 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | ZK250 | 26262 | ||||
| Overlap_left | C46F9 | |||||
| Clone_left_end | ZK250 | 26262 | ||||
| F52C6 | 1 | |||||
| Clone_right_end | C46F9 | 20056 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080887 | ||
| NDB_ID | _AF040645 | |||||
| NDB_SV | FO080887.1 | |||||
| Secondary_accession | AF040645 | |||||
| DB_remark | The 5' clone is C46F9, 1300 bp overlap; the 3' clone is ZK250, 1700 bp overlap. Actual start of this clone is at base position 1 of F52C6; actual end is at 14335 of ZK250. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wamsley P | ||||
| Gibson A | ||||||
| From_laboratory | RW | |||||
| Date | 03 Jun 1997 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F52C6 | ||||
| Remark | [20100424 wnash] added 1 bp (c) at position 20150 (between GCACTGCCGC and TCCGGTAGAA) | |||||
| annotated 970827-js | ||||||
| 971112-js annotattion check; decided stops around 23600 didn't need to be check | ||||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 657bc05dbeece8f3048f3f22f9b9f317 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 03 Jun 1997 00:00:00 | |||||
| Map | Sequence-II | |||||
| Interpolated_map_position | II | -14.1498 | ||||
| Method | Genomic_canonical |
