WormBase Tree Display for Gene: WBGene00018049

WBGene00018049 SMap: S_parent: Sequence: F35D11
  Identity: Version: 2
    Name: CGC_name: clec-138 Person_evidence: WBPerson2531
      Sequence_name: F35D11.9
      Molecular_name: F35D11.9
        F35D11.9.1
        CE02722
      Other_name: CELE_F35D11.9 Accession_evidence: NDB BX284602
      Public_name: clec-138
    DB_info: Database: AceView gene 2E910
        WormQTL gene WBGene00018049
        WormFlux gene WBGene00018049
        NDB locus_tag CELE_F35D11.9
        NCBI gene 185282
        RefSeq protein NM_062414.4
        TREEFAM TREEFAM_ID TF315532
        TrEMBL UniProtAcc Q20038
        UniProt_GCRP UniProtAcc Q20038
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-138
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (13)
    RNASeq_FPKM (74)
    Ortholog (35)
    Paralog: WBGene00007313 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00015821 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00017139 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00018047 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00018048 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00020065 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020067 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00018050 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in male-specific anatomical entity and in male based on RNA-seq and microarray studies. Is affected by several genes including rrf-3; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F35D11.9
    Corresponding_transcript: F35D11.9.1
    Associated_feature: WBsf222935
  Experimental_info: RNAi_result: WBRNAi00112627 Inferred_automatically: RNAi_primary
      WBRNAi00031771 Inferred_automatically: RNAi_primary
      WBRNAi00046325 Inferred_automatically: RNAi_primary
      WBRNAi00014322 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015129
      Expr1150214
      Expr2010067
      Expr2028309
    Drives_construct: WBCnstr00026814
    Construct_product: WBCnstr00026814
    Microarray_results (16)
    Expression_cluster (55)
    Interaction (16)
  Map_info: Map: II Position: -3.82074 Error: 0.00295
    Positive: Positive_clone: F35D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene