WormBase Tree Display for Gene: WBGene00018050
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| WBGene00018050 | SMap | S_parent | Sequence | F35D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-139 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F35D11.10 | ||||||||
| Molecular_name | F35D11.10 | ||||||||
| F35D11.10.1 | |||||||||
| CE39016 | |||||||||
| Other_name | CELE_F35D11.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-139 | ||||||||
| DB_info | Database | AceView | gene | 2E912 | |||||
| WormQTL | gene | WBGene00018050 | |||||||
| WormFlux | gene | WBGene00018050 | |||||||
| NDB | locus_tag | CELE_F35D11.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018050|UniProtKB=Q20039 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 185283 | |||||||
| RefSeq | protein | NM_062415.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315532 | |||||||
| TrEMBL | UniProtAcc | Q20039 | |||||||
| UniProt_GCRP | UniProtAcc | Q20039 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-139 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (118) | |||||||||
| Structured_description | Automated_description | Enriched in arc ant V and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including bisphenol A; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Phosphorylation site and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35D11.10 | |||||||
| Corresponding_CDS_history | F35D11.10:wp147 | ||||||||
| Corresponding_transcript | F35D11.10.1 | ||||||||
| Other_sequence | FD515825.1 | ||||||||
| CSC01573_1 | |||||||||
| Associated_feature | WBsf665466 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031769 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014315 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046317 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024050 | ||||||||
| Expr1150206 | |||||||||
| Expr2010068 | |||||||||
| Expr2028310 | |||||||||
| Drives_construct | WBCnstr00026813 | ||||||||
| Construct_product | WBCnstr00026813 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000194101 | ||||||||
| WBInteraction000343824 | |||||||||
| WBInteraction000380259 | |||||||||
| WBInteraction000383227 | |||||||||
| WBInteraction000392706 | |||||||||
| WBInteraction000433692 | |||||||||
| Map_info | Map | II | Position | -3.80038 | Error | 0.004749 | |||
| Positive | Positive_clone | F35D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
