WormBase Tree Display for Gene: WBGene00017139
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| WBGene00017139 | SMap | S_parent | Sequence | EEED8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-141 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | EEED8.11 | ||||||||
| Molecular_name | EEED8.11 | ||||||||
| EEED8.11.1 | |||||||||
| CE01884 | |||||||||
| Other_name | CELE_EEED8.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-141 | ||||||||
| DB_info | Database | AceView | gene | 2F696 | |||||
| WormQTL | gene | WBGene00017139 | |||||||
| WormFlux | gene | WBGene00017139 | |||||||
| NDB | locus_tag | CELE_EEED8.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017139|UniProtKB=Q09300 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 184044 | |||||||
| RefSeq | protein | NM_062619.4 | |||||||
| SwissProt | UniProtAcc | Q09300 | |||||||
| TREEFAM | TREEFAM_ID | TF315532 | |||||||
| UniProt_GCRP | UniProtAcc | Q09300 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-141 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog (118) | |||||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and lin-4 based on microarray and RNA-seq studies. Is affected by eight chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | EEED8.11 | |||||||
| Corresponding_transcript | EEED8.11.1 | ||||||||
| Other_sequence | Dviv_isotig18707 | ||||||||
| CR00192 | |||||||||
| CRC01955_1 | |||||||||
| Tcir_isotig25264 | |||||||||
| CBC04049_1 | |||||||||
| FD517581.1 | |||||||||
| MC04335 | |||||||||
| CSC01041_1 | |||||||||
| JO474949.1 | |||||||||
| Associated_feature | WBsf987878 | ||||||||
| WBsf1012227 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112628 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043691 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030506 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012698 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012390 | ||||||||
| Expr1147675 | |||||||||
| Expr2010070 | |||||||||
| Expr2028312 | |||||||||
| Drives_construct | WBCnstr00027539 | ||||||||
| Construct_product | WBCnstr00027539 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (53) | |||||||||
| Map_info | Map | II | Position | -1.70256 | Error | 0.028816 | |||
| Positive | Positive_clone | EEED8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
