WormBase Tree Display for Gene: WBGene00017969
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WBGene00017969 | SMap | S_parent | Sequence | F32A5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | ctsa | |||||
Allele (47) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00047863 | |||||
00047864 | ||||||
00047865 | ||||||
00047866 | ||||||
00047867 | ||||||
00047868 | ||||||
00123235 | ||||||
00123236 | ||||||
Ortholog (35) | ||||||
Paralog | WBGene00007462 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00008741 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00012445 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00012530 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00018271 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00021503 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00019605 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00019617 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00009058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Human ortholog(s) of this gene implicated in galactosialidosis. Is an ortholog of human CTSA (cathepsin A). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | |
DOID:0080540 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | |||
Molecular_info | Corresponding_CDS | F32A5.3 | ||||
Corresponding_transcript | F32A5.3.1 | |||||
Other_sequence (24) | ||||||
Associated_feature | WBsf644363 | |||||
WBsf644364 | ||||||
WBsf717697 | ||||||
WBsf1012500 | ||||||
WBsf221576 | ||||||
WBsf221577 | ||||||
Experimental_info | RNAi_result | WBRNAi00014193 | Inferred_automatically | RNAi_primary | ||
WBRNAi00046075 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00076366 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00031643 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089063 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00115158 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1025781 | |||||
Expr1037730 | ||||||
Expr1149965 | ||||||
Expr2003197 | ||||||
Expr2021409 | ||||||
Drives_construct | WBCnstr00026877 | |||||
Construct_product | WBCnstr00026877 | |||||
Microarray_results (19) | ||||||
Expression_cluster (218) | ||||||
Interaction (15) | ||||||
Map_info | Map | II | Position | 0.49969 | ||
Positive | Positive_clone | F32A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00037777 | |||||
WBPaper00038491 | ||||||
WBPaper00043670 | ||||||
WBPaper00055090 | ||||||
WBPaper00059755 | ||||||
WBPaper00063976 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |