WormBase Tree Display for Gene: WBGene00017969
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WBGene00017969 | SMap | S_parent | Sequence | F32A5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ctsa-3.1 | |||||
Sequence_name | F32A5.3 | ||||||
Molecular_name | F32A5.3 | ||||||
F32A5.3.1 | |||||||
CE01273 | |||||||
Other_name | CELE_F32A5.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | ctsa-3.1 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ctsa | ||||||
Allele (47) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00047863 | ||||||
00047864 | |||||||
00047865 | |||||||
00047866 | |||||||
00047867 | |||||||
00047868 | |||||||
00123235 | |||||||
00123236 | |||||||
Ortholog (35) | |||||||
Paralog | WBGene00007462 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00008741 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00012445 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00012530 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00018271 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021503 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019605 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019617 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00009058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Human ortholog(s) of this gene implicated in galactosialidosis. Is an ortholog of human CTSA (cathepsin A). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||
DOID:0080540 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9251) | ||||
Molecular_info | Corresponding_CDS | F32A5.3 | |||||
Corresponding_transcript | F32A5.3.1 | ||||||
Other_sequence (24) | |||||||
Associated_feature | WBsf644363 | ||||||
WBsf644364 | |||||||
WBsf717697 | |||||||
WBsf1012500 | |||||||
WBsf221576 | |||||||
WBsf221577 | |||||||
Experimental_info | RNAi_result | WBRNAi00014193 | Inferred_automatically | RNAi_primary | |||
WBRNAi00046075 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076366 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031643 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089063 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115158 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025781 | ||||||
Expr1037730 | |||||||
Expr1149965 | |||||||
Expr2003197 | |||||||
Expr2021409 | |||||||
Drives_construct | WBCnstr00026877 | ||||||
Construct_product | WBCnstr00026877 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (218) | |||||||
Interaction (15) | |||||||
Map_info | Map | II | Position | 0.49969 | |||
Positive | Positive_clone | F32A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00037777 | ||||||
WBPaper00038491 | |||||||
WBPaper00043670 | |||||||
WBPaper00055090 | |||||||
WBPaper00059755 | |||||||
WBPaper00063976 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |