WormBase Tree Display for Gene: WBGene00017671
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WBGene00017671 | SMap | S_parent | Sequence | F21F3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 14 Sep 2010 16:06:52 | WBPerson2970 | Name_change | CGC_name | pgal-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pgal | ||||||||
Allele (62) | |||||||||
Strain | WBStrain00032656 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00047897 | ||||||||
00047898 | |||||||||
00047899 | |||||||||
00047900 | |||||||||
00047901 | |||||||||
00047902 | |||||||||
00047903 | |||||||||
00117744 | |||||||||
00117745 | |||||||||
00117746 | |||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00006541 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00020556 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00022144 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity and peptidylamidoglycolate lyase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region. Expressed in head ganglion; nervous system; and tail ganglion. Human ortholog(s) of this gene implicated in prostate adenocarcinoma. Is an ortholog of human PAM (peptidylglycine alpha-amidating monooxygenase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:2526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8596) | ||||
Molecular_info | Corresponding_CDS | F21F3.1 | |||||||
Corresponding_CDS_history | F21F3.1:wp90 | ||||||||
Corresponding_transcript | F21F3.1.1 | ||||||||
Other_sequence (142) | |||||||||
Associated_feature | WBsf643250 | ||||||||
WBsf643251 | |||||||||
WBsf656263 | |||||||||
WBsf656264 | |||||||||
WBsf983533 | |||||||||
WBsf983534 | |||||||||
WBsf1009729 | |||||||||
WBsf217592 | |||||||||
WBsf217593 | |||||||||
Experimental_info | RNAi_result | WBRNAi00045216 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031228 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094865 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003415 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13714 | ||||||||
Expr1027731 | |||||||||
Expr1037584 | |||||||||
Expr1149149 | |||||||||
Expr2014855 | |||||||||
Expr2033090 | |||||||||
Drives_construct | WBCnstr00027114 | ||||||||
WBCnstr00039951 | |||||||||
Construct_product | WBCnstr00027114 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (314) | |||||||||
Interaction (114) | |||||||||
Map_info | Map | I | Position | -0.619151 | Error | 0.014097 | |||
Positive | Positive_clone | F21F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |