WormBase Tree Display for Gene: WBGene00017640
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| WBGene00017640 | SMap | S_parent | Sequence | F20D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F20D6.11 | |||||||
| Molecular_name | F20D6.11 | ||||||||
| F20D6.11.1 | |||||||||
| CE27373 | |||||||||
| Other_name | CELE_F20D6.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F20D6.11 | ||||||||
| DB_info | Database | AceView | gene | 5I678 | |||||
| WormQTL | gene | WBGene00017640 | |||||||
| WormFlux | gene | WBGene00017640 | |||||||
| NDB | locus_tag | CELE_F20D6.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017640|UniProtKB=Q19655 | |||||||
| family | PTHR43557 | ||||||||
| NCBI | gene | 179196 | |||||||
| RefSeq | protein | NM_072711.5 | |||||||
| TREEFAM | TREEFAM_ID | TF314028 | |||||||
| TrEMBL | UniProtAcc | Q19655 | |||||||
| UniProt_GCRP | UniProtAcc | Q19655 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| Strain | WBStrain00001934 | ||||||||
| WBStrain00031460 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00006937 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007744 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008117 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010794 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00014028 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015553 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | F20D6.11 encodes a putative flavin-adenine dinucleotide (FAD)-binding oxidoreductase orthologous to human AIFM3 (AIFL), and paralogous to WAH-1 and mammalian PDCD8; F20D6.11 is expressed in pharynx, anal depressor and body wall muscles, the reproductive system (including spermatheca), and unidentified tail cells; given its orthology to AIFM3, F20D6.11 may promote apoptosis. | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00029375 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 28 Jan 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity, acting on NAD(P)H. Predicted to be involved in execution phase of apoptosis. Predicted to be located in endoplasmic reticulum and mitochondrial inner membrane. Expressed in tail. Is an ortholog of human AIFM3 (apoptosis inducing factor mitochondria associated 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20D6.11 | |||||||
| Corresponding_transcript | F20D6.11.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf234038 | ||||||||
| WBsf234039 | |||||||||
| WBsf234040 | |||||||||
| WBsf234041 | |||||||||
| WBsf234042 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Chronogram1555 | ||||||||
| Expr5808 | |||||||||
| Expr1028775 | |||||||||
| Expr1037572 | |||||||||
| Expr1149060 | |||||||||
| Expr2002785 | |||||||||
| Expr2021003 | |||||||||
| Drives_construct | WBCnstr00002722 | ||||||||
| WBCnstr00027139 | |||||||||
| Construct_product | WBCnstr00027139 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Positive | Positive_clone | F20D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.1825 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043031 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
