WormBase Tree Display for Gene: WBGene00017288
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| WBGene00017288 | SMap | S_parent | Sequence | F09E5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F09E5.10 | ||||||||
| Molecular_name | F09E5.10 | |||||||||
| Other_name | CELE_F09E5.10 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F09E5.10 | |||||||||
| DB_info | Database | AceView | gene | 2F638 | ||||||
| WormQTL | gene | WBGene00017288 | ||||||||
| WormFlux | gene | WBGene00017288 | ||||||||
| NDB | locus_tag | CELE_F09E5.10 | ||||||||
| NCBI | gene | 173905 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 21 Oct 2019 15:28:13 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele | WBVar00731493 | |||||||||
| WBVar01499702 | ||||||||||
| WBVar00731494 | ||||||||||
| WBVar00731495 | ||||||||||
| WBVar00731496 | ||||||||||
| WBVar00731497 | ||||||||||
| WBVar01498435 | ||||||||||
| WBVar01499376 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00028945 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00057496 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00193345 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00021239 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in AVK; germ line; intestine; and sensory neurons based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by Quercetin; Humic Substances; and silicon dioxide nanoparticle based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F09E5.10:wp274 | ||||||||
| Corresponding_pseudogene | F09E5.10 | |||||||||
| Experimental_info | Expr_pattern | Expr1026853 | ||||||||
| Expr1148087 | ||||||||||
| Expr2002342 | ||||||||||
| Expr2020560 | ||||||||||
| Drives_construct | WBCnstr00027421 | |||||||||
| Construct_product | WBCnstr00027421 | |||||||||
| Microarray_results | SMD_F09E5.10 | |||||||||
| 185165_s_at | ||||||||||
| A_12_P158730 | ||||||||||
| Aff_F09E5.10 | ||||||||||
| GPL19516_CGZ0015126 | ||||||||||
| GPL3518_CE02605 | ||||||||||
| GPL8304_CE_WBGene00017288_A | ||||||||||
| cea2.d.19411 | ||||||||||
| Expression_cluster (86) | ||||||||||
| Interaction (21) | ||||||||||
| Map_info | Positive | Positive_clone | F09E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -1.78756 | ||||||||
| Method | Gene |
