WormBase Tree Display for Gene: WBGene00016266
expand all nodes | collapse all nodes | view schema
| WBGene00016266 | SMap | S_parent | Sequence | C30F12 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | idhg | |||||
| Allele (25) | ||||||
| Strain | WBStrain00032631 | |||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (11) | ||||||
| Ortholog (39) | ||||||
| Paralog | WBGene00007993 | Caenorhabditis elegans | From_analysis | Panther | ||
| WormBase-Compara | ||||||
| WBGene00009440 | Caenorhabditis elegans | From_analysis | Panther | |||
| WormBase-Compara | ||||||
| WBGene00009664 | Caenorhabditis elegans | From_analysis | Panther | |||
| WormBase-Compara | ||||||
| Structured_description | Concise_description | C30F12.7 encodes the C. elegans homolog of the gamma subunit of an NAD+-dependent mitochondrial isocitrate dehydrogenase; by homology, the product of C30F12.7 is predicted to catalyze the formation of alpha-ketoglutarate from isocitrate as part of the citric acid cycle. | Curator_confirmed | WBPerson1843 | ||
| Date_last_updated | 26 Oct 2011 00:00:00 | |||||
| Automated_description | Predicted to enable NAD binding activity and magnesium ion binding activity. Predicted to be involved in isocitrate metabolic process and tricarboxylic acid cycle. Predicted to be located in mitochondrion. Is an ortholog of human IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma). | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | C30F12.7 | ||||
| Corresponding_transcript | C30F12.7.1 | |||||
| Other_sequence (69) | ||||||
| Associated_feature | WBsf984042 | |||||
| WBsf984043 | ||||||
| WBsf217927 | ||||||
| Experimental_info | RNAi_result | WBRNAi00084390 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00029360 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00041552 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00003042 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1027079 | |||||
| Expr1145570 | ||||||
| Expr2012674 | ||||||
| Expr2030910 | ||||||
| Drives_construct | WBCnstr00028205 | |||||
| Construct_product | WBCnstr00028205 | |||||
| Microarray_results (19) | ||||||
| Expression_cluster (173) | ||||||
| Interaction (186) | ||||||
| Map_info | Map | I | Position | 1.58364 | ||
| Positive | Positive_clone | C30F12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00027145 | |||||
| WBPaper00028451 | ||||||
| WBPaper00038491 | ||||||
| WBPaper00051770 | ||||||
| WBPaper00055090 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
