WormBase Tree Display for Gene: WBGene00009664
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| WBGene00009664 | SMap | S_parent | Sequence | F43G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idha-1 | Person_evidence | WBPerson1983 | |||||
| WBPerson261 | |||||||||
| Sequence_name | F43G9.1 | ||||||||
| Molecular_name | F43G9.1 | ||||||||
| F43G9.1.1 | |||||||||
| CE34018 | |||||||||
| Other_name | CELE_F43G9.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | idha-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | idha-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idha | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00002656 | ||||||||
| WBStrain00001311 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00007993 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009440 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00016266 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | F43G9.1 encodes the C. elegans homolog of the alpha subunit of an NAD+-dependent mitochondrial isocitrate dehydrogenase; by homology, the product of F43G9.1 is predicted to catalyze the formation of alpha-ketoglutarate from isocitrate as part of the citric acid cycle. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 26 Oct 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable isocitrate dehydrogenase (NAD+) activity. Involved in protein folding. Located in mitochondrion. Expressed in head and tail. Human ortholog(s) of this gene implicated in retinitis pigmentosa 90. Is an ortholog of human IDH3A (isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112147 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5384) | ||||
| Molecular_info | Corresponding_CDS | F43G9.1 | |||||||
| Corresponding_CDS_history | F43G9.1:wp101 | ||||||||
| Corresponding_transcript | F43G9.1.1 | ||||||||
| Other_sequence (85) | |||||||||
| Associated_feature | WBsf649400 | ||||||||
| WBsf984466 | |||||||||
| WBsf984467 | |||||||||
| WBsf219948 | |||||||||
| WBsf219949 | |||||||||
| WBsf219950 | |||||||||
| WBsf219951 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram58 | ||||||||
| Chronogram1615 | |||||||||
| Expr6062 | |||||||||
| Expr6063 | |||||||||
| Expr1022195 | |||||||||
| Expr1034222 | |||||||||
| Expr1151075 | |||||||||
| Expr2012671 | |||||||||
| Expr2030907 | |||||||||
| Drives_construct | WBCnstr00002204 | ||||||||
| WBCnstr00004253 | |||||||||
| WBCnstr00032013 | |||||||||
| Construct_product | WBCnstr00032013 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (226) | |||||||||
| Map_info | Map | I | Position | 2.9924 | |||||
| Positive | Positive_clone | F43G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
