WormBase Tree Display for Gene: WBGene00016037
expand all nodes | collapse all nodes | view schema
| WBGene00016037 | SMap | S_parent | Sequence | C24A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dop-6 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C24A8.1 | ||||||||
| Molecular_name | C24A8.1 | ||||||||
| C24A8.1.1 | |||||||||
| CE53191 | |||||||||
| Other_name | CELE_C24A8.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dop-6 | ||||||||
| DB_info | Database | AceView | gene | XE943 | |||||
| WormQTL | gene | WBGene00016037 | |||||||
| WormFlux | gene | WBGene00016037 | |||||||
| NDB | locus_tag | CELE_C24A8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016037|UniProtKB=P91096 | |||||||
| family | PTHR24247 | ||||||||
| NCBI | gene | 180706 | |||||||
| RefSeq | protein | NM_001373279.1 | |||||||
| TREEFAM | TREEFAM_ID | TF334382 | |||||||
| TrEMBL | UniProtAcc | P91096 | |||||||
| UniProt_GCRP | UniProtAcc | P91096 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Feb 2010 11:37:06 | WBPerson2970 | Name_change | CGC_name | dop-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dop | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00032373 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | dop-6 encodes an homolog of mammalian D2 or D3 dopamine receptors, and a paralog of DOP-2/-3; dop-6 is expressed in the nervous system; because of its paralogy, DOP-6 might act redundantly with DOP-2 to promote the basal slowing response to bacterial feeding, or it might account for the residual response to excess dopamine seen in triple dop-1/-2/-3 mutants; but dop-6 otherwise has no obvious function in RNAi assays of brood size, egg laying, pharyngeal pumping, locomotion, or male mating. | Paper_evidence | WBPaper00006132 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00024527 | |||||||||
| WBPaper00028762 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 25 May 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; chemical synaptic transmission; and dopamine receptor signaling pathway. Predicted to be located in dendrite. Expressed in several structures, including AVF; SMDVL; head neurons; intestine; and lumbar neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24A8.1 | |||||||
| Corresponding_CDS_history | C24A8.1:wp150 | ||||||||
| C24A8.1:wp187 | |||||||||
| C24A8.1:wp230 | |||||||||
| C24A8.1:wp271 | |||||||||
| Corresponding_transcript | C24A8.1.1 | ||||||||
| Other_sequence | JI213792.1 | ||||||||
| Oden_isotig27679 | |||||||||
| Oden_isotig21212 | |||||||||
| JI216385.1 | |||||||||
| Associated_feature | WBsf662676 | ||||||||
| WBsf1004901 | |||||||||
| WBsf1004902 | |||||||||
| WBsf1004903 | |||||||||
| WBsf1022764 | |||||||||
| WBsf1022765 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00069733 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00069717 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011084 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041057 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069701 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069725 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069709 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072194 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4335 | ||||||||
| Expr5322 | |||||||||
| Expr11993 | |||||||||
| Expr13040 | |||||||||
| Expr15336 | |||||||||
| Expr1013995 | |||||||||
| Expr1145095 | |||||||||
| Expr2011031 | |||||||||
| Expr2029268 | |||||||||
| Drives_construct | WBCnstr00003258 | ||||||||
| WBCnstr00011928 | |||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction | WBInteraction000233400 | ||||||||
| WBInteraction000255721 | |||||||||
| Map_info | Map | X | Position | -7.78823 | Error | 0.001646 | |||
| Positive | Positive_clone | C24A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024527 | ||||||||
| WBPaper00028762 | |||||||||
| WBPaper00031915 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00060134 | |||||||||
| WBPaper00063830 | |||||||||
| WBPaper00064144 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
