WormBase Tree Display for Gene: WBGene00015867
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| WBGene00015867 | SMap | S_parent | Sequence | C16H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ncs-7 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C16H3.1 | ||||||||
| Molecular_name | C16H3.1a | ||||||||
| C16H3.1a.1 | |||||||||
| CE53241 | |||||||||
| C16H3.1b | |||||||||
| CE53380 | |||||||||
| C16H3.1b.1 | |||||||||
| Other_name | CELE_C16H3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ncs-7 | ||||||||
| DB_info | Database | AceView | gene | XS233 | |||||
| WormQTL | gene | WBGene00015867 | |||||||
| WormFlux | gene | WBGene00015867 | |||||||
| NDB | locus_tag | CELE_C16H3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015867|UniProtKB=Q94172 | |||||||
| family | PTHR23055 | ||||||||
| NCBI | gene | 182694 | |||||||
| RefSeq | protein | NM_001373632.3 | |||||||
| NM_001373633.4 | |||||||||
| TrEMBL | UniProtAcc | A0A4V0IK35 | |||||||
| A0A4V0ILQ4 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A4V0IK35 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | ncs-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncs | ||||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003805 | ||||||||
| 00121602 | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00003563 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003564 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008998 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021116 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007710 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Expressed in neurons and vulval muscle. Is an ortholog of human KCNIP1 (potassium voltage-gated channel interacting protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16H3.1a | |||||||
| C16H3.1b | |||||||||
| Corresponding_CDS_history | C16H3.1:wp107 | ||||||||
| C16H3.1:wp271 | |||||||||
| Corresponding_transcript | C16H3.1a.1 | ||||||||
| C16H3.1b.1 | |||||||||
| Associated_feature | WBsf1008971 | ||||||||
| WBsf1008972 | |||||||||
| WBsf1008973 | |||||||||
| WBsf1025066 | |||||||||
| WBsf1025067 | |||||||||
| WBsf1025068 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028980 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9893 | ||||||||
| Expr12201 | |||||||||
| Expr1018150 | |||||||||
| Expr1144788 | |||||||||
| Expr2013916 | |||||||||
| Expr2032156 | |||||||||
| Drives_construct | WBCnstr00009830 | ||||||||
| WBCnstr00014382 | |||||||||
| WBCnstr00020401 | |||||||||
| WBCnstr00028500 | |||||||||
| Construct_product | WBCnstr00009830 | ||||||||
| WBCnstr00014382 | |||||||||
| WBCnstr00020401 | |||||||||
| WBCnstr00028500 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (60) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | X | Position | 24.5429 | |||||
| Positive | Positive_clone | C16H3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030467 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
