WormBase Tree Display for Gene: WBGene00015854
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WBGene00015854 | SMap | S_parent | Sequence | C16C8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | C16C8.17 | |||||
Molecular_name | C16C8.17 | ||||||
C16C8.17.1 | |||||||
CE53891 | |||||||
Other_name | CELE_C16C8.17 | Accession_evidence | NDB | BX284602 | |||
Public_name | C16C8.17 | ||||||
DB_info | Database | AceView | gene | 2D733 | |||
WormQTL | gene | WBGene00015854 | |||||
WormFlux | gene | WBGene00015854 | |||||
NDB | locus_tag | CELE_C16C8.17 | |||||
NCBI | gene | 43578468 | |||||
RefSeq | protein | NM_001377758.1 | |||||
TREEFAM | TREEFAM_ID | TF342747 | |||||
TrEMBL | UniProtAcc | P91058 | |||||
UniProt_GCRP | UniProtAcc | P91058 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (23) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00053058 | Caenorhabditis remanei | From_analysis | TreeFam | |||
chrII_pilon.g3979 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00008826 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00009360 | |||||||
WBGene00011921 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00018822 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00044538 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00044162 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00016770 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00077624 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00305093 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in ABaraapapp; ABaraapppp; germ line; male-specific anatomical entity; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including allantoin; Psoralens; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C16C8.17 | |||||
Corresponding_CDS_history | C16C8.17:wp274 | ||||||
Corresponding_transcript | C16C8.17.1 | ||||||
Associated_feature | WBsf987256 | ||||||
WBsf1011901 | |||||||
WBsf1011902 | |||||||
WBsf221011 | |||||||
Experimental_info | RNAi_result | WBRNAi00112575 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1010799 | ||||||
Expr1144758 | |||||||
Expr2000865 | |||||||
Expr2019082 | |||||||
Drives_construct | WBCnstr00028513 | ||||||
Construct_product | WBCnstr00028513 | ||||||
Microarray_results | SMD_C16C8.17 | ||||||
SMD_C16C8.17:2 | |||||||
GPL19516_CGZ0004923 | |||||||
GPL21109_C16C8.17 | |||||||
GPL8673_C16C8_17P00086 | |||||||
Expression_cluster (52) | |||||||
Interaction | WBInteraction000151223 | ||||||
WBInteraction000301634 | |||||||
WBInteraction000399653 | |||||||
WBInteraction000429753 | |||||||
WBInteraction000434795 | |||||||
Map_info | Positive | Positive_clone | C16C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | -6.30323 | |||||
Method | Gene |