WormBase Tree Display for Gene: WBGene00013425
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WBGene00013425 | SMap | S_parent | Sequence | Y66A7AR | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ceh-91 | Person_evidence | WBPerson260 | |||
WBPerson83 | |||||||
Sequence_name | Y66A7A.5 | ||||||
Molecular_name | Y66A7A.5 | ||||||
Y66A7A.5.1 | |||||||
CE34229 | |||||||
Other_name | CELE_Y66A7A.5 | Accession_evidence | NDB | BX284603 | |||
Public_name | ceh-91 | ||||||
DB_info | Database | AceView | gene | 3M713 | |||
WormQTL | gene | WBGene00013425 | |||||
WormFlux | gene | WBGene00013425 | |||||
NDB | locus_tag | CELE_Y66A7A.5 | |||||
NCBI | gene | 176594 | |||||
RefSeq | protein | NM_067102.5 | |||||
TrEMBL | UniProtAcc | Q7K6J1 | |||||
UniProt_GCRP | UniProtAcc | Q7K6J1 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ceh | ||||||
Allele (215) | |||||||
Strain | WBStrain00003390 | ||||||
WBStrain00051942 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog | CSP32.g14692 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | |||
CSP32.g4877 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||
CSP39.g1072 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
CSP39.g14250 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
CSP39.g17787 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
CSP39.g5574 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
CSP39.g645 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
chrIII_pilon.g9062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | ceh-91 is a divergent homeobox gene; it encodes a highly divergent double homeobox domain (named Hochob), and two divergent homeodomains; most homeodomain proteins bind DNA and function as transcription factors; ceh-91 is expressed in intestine, renal gland cells, and head neurons; | Paper_evidence | WBPaper00004651 | |||
WBPaper00005654 | |||||||
WBPaper00006525 | |||||||
WBPaper00024497 | |||||||
WBPaper00025054 | |||||||
WBPaper00025108 | |||||||
WBPaper00046864 | |||||||
Person_evidence | WBPerson83 | ||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 20 Apr 2017 00:00:00 | ||||||
Automated_description | Predicted to enable DNA binding activity and chromatin binding activity. Predicted to be involved in chromatin organization and regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in dorsal nerve cord; head muscle; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y66A7A.5 | |||||
Corresponding_CDS_history | Y66A7A.5:wp101 | ||||||
Corresponding_transcript | Y66A7A.5.1 | ||||||
Other_sequence (15) | |||||||
Associated_feature | WBsf978444 | ||||||
WBsf994442 | |||||||
WBsf994443 | |||||||
WBsf994444 | |||||||
WBsf1016043 | |||||||
WBsf225842 | |||||||
Transcription_factor | WBTranscriptionFactor001111 | ||||||
Experimental_info | RNAi_result | WBRNAi00001859 | Inferred_automatically | RNAi_primary | |||
WBRNAi00057926 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037714 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011726 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021251 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006345 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7092 | ||||||
Expr7736 | |||||||
Expr15655 | |||||||
Expr1017618 | |||||||
Expr1035996 | |||||||
Expr1161356 | |||||||
Expr2009916 | |||||||
Expr2028156 | |||||||
Drives_construct | WBCnstr00003859 | ||||||
WBCnstr00012881 | |||||||
WBCnstr00029642 | |||||||
WBCnstr00042423 | |||||||
Construct_product | WBCnstr00029642 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (96) | |||||||
Interaction | WBInteraction000528076 | ||||||
Map_info | Map | III | Position | 11.2571 | Error | 0.083073 | |
Positive | Positive_clone | Y66A7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00060123 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |