WormBase Tree Display for Gene: WBGene00013313
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| WBGene00013313 | SMap | S_parent | Sequence | Y57G11C | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y57G11C.18 | ||||||||
| Molecular_name | Y57G11C.18 | |||||||||
| Other_name | CELE_Y57G11C.18 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y57G11C.18 | |||||||||
| DB_info | Database | AceView | gene | 4P604 | ||||||
| WormQTL | gene | WBGene00013313 | ||||||||
| WormFlux | gene | WBGene00013313 | ||||||||
| NDB | locus_tag | CELE_Y57G11C.18 | ||||||||
| NCBI | gene | 190375 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 21 Sep 2017 13:53:58 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (63) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00069063 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00193435 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00073081 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00160900 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| WBGene00190004 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
| WBGene00075448 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00080356 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Paralog | WBGene00018844 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in AVK; OLL; PVD; neurons; and sensory neurons based on microarray and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by Sodium Chloride; Rifampin; and Atrazine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y57G11C.18:wp167 | ||||||||
| Y57G11C.18:wp261 | ||||||||||
| Corresponding_pseudogene | Y57G11C.18 | |||||||||
| Experimental_info | Expr_pattern | Expr1023773 | ||||||||
| Expr1035940 | ||||||||||
| Expr1161102 | ||||||||||
| Expr2008052 | ||||||||||
| Expr2026291 | ||||||||||
| Drives_construct | WBCnstr00029692 | |||||||||
| Construct_product | WBCnstr00029692 | |||||||||
| Microarray_results | SMD_Y57G11C.18 | |||||||||
| A_12_P120004 | ||||||||||
| A_12_P152945 | ||||||||||
| GPL14144_Y57G11C.18_1010-1069_0.890_14_A | ||||||||||
| GPL3518_CE14960 | ||||||||||
| GPL8304_CE_WBGene00013313_A | ||||||||||
| GPL8673_Y57G11C_18P00634 | ||||||||||
| GPL8673_Y57G11C_18P01009 | ||||||||||
| GPL9450_Y57G11C.18 | ||||||||||
| cea2.d.45814 | ||||||||||
| Expression_cluster (47) | ||||||||||
| Interaction | WBInteraction000228911 | |||||||||
| WBInteraction000234875 | ||||||||||
| WBInteraction000331000 | ||||||||||
| WBInteraction000401900 | ||||||||||
| WBInteraction000421262 | ||||||||||
| WBInteraction000460779 | ||||||||||
| Map_info | Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 12.552 | ||||||||
| Method | Gene |
