WormBase Tree Display for Gene: WBGene00013215
expand all nodes | collapse all nodes | view schema
WBGene00013215 | SMap | S_parent | Sequence | Y54G11A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y54G11A.4 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_Y54G11A.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y54G11A.4 | ||||||||
DB_info | Database | AceView | gene | 2O583 | |||||
WormQTL | gene | WBGene00013215 | |||||||
WormFlux | gene | WBGene00013215 | |||||||
NDB | locus_tag | CELE_Y54G11A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013215|UniProtKB=Q9XW02 | |||||||
family | PTHR16263 | ||||||||
NCBI | gene | 190295 | |||||||
RefSeq | protein | NM_064574.4 | |||||||
TREEFAM | TREEFAM_ID | TF313343 | |||||||
TrEMBL | UniProtAcc | Q9XW02 | |||||||
UniProt_GCRP | UniProtAcc | Q9XW02 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (60) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00013216 | Caenorhabditis elegans | From_analysis (4) | ||||||
Structured_description | Automated_description | Enriched in intestine; neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tetratricopeptide repeat protein 38 and Tetratricopeptide-like helical domain superfamily. Is an ortholog of human TTC38 (tetratricopeptide repeat domain 38). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y54G11A.4 | |||||||
Corresponding_CDS_history | Y54G11A.4:wp198 | ||||||||
Corresponding_transcript | Y54G11A.4.1 | ||||||||
Other_sequence | BMC04875_1 | ||||||||
Associated_feature | WBsf658399 | ||||||||
WBsf717045 | |||||||||
WBsf990678 | |||||||||
WBsf990679 | |||||||||
Experimental_info | RNAi_result | WBRNAi00020986 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057429 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (4) | |||||||||
Microarray_results (13) | |||||||||
Expression_cluster (179) | |||||||||
Interaction | WBInteraction000177174 | ||||||||
WBInteraction000413720 | |||||||||
WBInteraction000578357 | |||||||||
Map_info | Positive | Positive_clone | Y54G11A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 22.9011 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |