WormBase Tree Display for Gene: WBGene00013144
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WBGene00013144 | SMap | S_parent | Sequence | Y53C12B | ||
---|---|---|---|---|---|---|
Identity | Version | 2 | ||||
Name (5) | ||||||
DB_info | Database | AceView | gene | 2K30 | ||
WormQTL | gene | WBGene00013144 | ||||
WormFlux | gene | WBGene00013144 | ||||
NDB | locus_tag | CELE_Y53C12B.2 | ||||
Panther | gene | CAEEL|WormBase=WBGene00013144|UniProtKB=O18216 | ||||
family | PTHR12826 | |||||
NCBI | gene | 174534 | ||||
RefSeq | protein | NM_063698.5 | ||||
SwissProt | UniProtAcc | O18216 | ||||
TREEFAM | TREEFAM_ID | TF300114 | ||||
UniProt_GCRP | UniProtAcc | O18216 | ||||
Species | Caenorhabditis elegans | |||||
History | Version_change (2) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pno | |||||
Allele (61) | ||||||
Strain | WBStrain00051193 | |||||
WBStrain00051907 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00031718 | |||||
00031719 | ||||||
00031720 | ||||||
00031721 | ||||||
00031722 | ||||||
00031723 | ||||||
00031724 | ||||||
00120072 | ||||||
00120073 | ||||||
Contained_in_operon | CEOP2452 | |||||
Ortholog (35) | ||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is an ortholog of human PNO1 (partner of NOB1 homolog). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y53C12B.2 | ||||
Corresponding_transcript | Y53C12B.2.1 | |||||
Other_sequence (80) | ||||||
Associated_feature (8) | ||||||
Experimental_info | RNAi_result | WBRNAi00076812 | Inferred_automatically | RNAi_primary | ||
WBRNAi00057256 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00075896 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00009378 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00037405 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00106944 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (5) | ||||||
Drives_construct | WBCnstr00029745 | |||||
Construct_product | WBCnstr00029745 | |||||
Microarray_results (15) | ||||||
Expression_cluster (105) | ||||||
Interaction (194) | ||||||
Map_info | Map | II | Position | 1.70646 | ||
Positive | Positive_clone | Y53C12B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00049828 | ||||||
WBPaper00055090 | ||||||
WBPaper00058216 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |