WormBase Tree Display for Gene: WBGene00011877
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WBGene00011877 | SMap | S_parent | Sequence | T21B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T21B4.3 | |||||||
Molecular_name | T21B4.3 | ||||||||
T21B4.3.1 | |||||||||
CE16428 | |||||||||
Other_name | CELE_T21B4.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | T21B4.3 | ||||||||
DB_info | Database | AceView | gene | 2M784 | |||||
WormQTL | gene | WBGene00011877 | |||||||
WormFlux | gene | WBGene00011877 | |||||||
NDB | locus_tag | CELE_T21B4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011877|UniProtKB=O18096 | |||||||
family | PTHR21629 | ||||||||
NCBI | gene | 188673 | |||||||
RefSeq | protein | NM_064265.3 | |||||||
TrEMBL | UniProtAcc | O18096 | |||||||
UniProt_GCRP | UniProtAcc | O18096 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (63) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00033939 | Caenorhabditis briggsae | From_analysis | OMA | |||||
CSP31.g19162 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g19163 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g19165 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP38.g11655 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00003.g289 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold629.g13619 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Sp34_20162100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g6188 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00011077 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011078 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011079 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00012571 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00012570 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WBGene00019306 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in IL socket cell; arc ant V; hyp3; and neurons based on tiling array; single-cell RNA-seq; and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by methylmercuric chloride; Colistin; and Sirolimus based on microarray studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T21B4.3 | |||||||
Corresponding_transcript | T21B4.3.1 | ||||||||
Associated_feature | WBsf650653 | ||||||||
WBsf650654 | |||||||||
WBsf990118 | |||||||||
WBsf990119 | |||||||||
WBsf224074 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035739 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018951 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053695 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015055 | ||||||||
Expr1157248 | |||||||||
Expr2006310 | |||||||||
Expr2024531 | |||||||||
Drives_construct | WBCnstr00030317 | ||||||||
Construct_product | WBCnstr00030317 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (55) | |||||||||
Interaction (33) | |||||||||
Map_info | Positive | Positive_clone | T21B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 10.1524 | |||||||
Method | Gene |