WormBase Tree Display for Gene: WBGene00011078
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WBGene00011078 | SMap | S_parent | Sequence | R07B1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R07B1.6 | |||||||
Molecular_name | R07B1.6a | ||||||||
R07B1.6a.1 | |||||||||
CE01632 | |||||||||
R07B1.6b | |||||||||
Other_name | CELE_R07B1.6 | Accession_evidence | NDB | BX284606 | |||||
Public_name | R07B1.6 | ||||||||
DB_info | Database | AceView | gene | XK485 | |||||
WormQTL | gene | WBGene00011078 | |||||||
WormFlux | gene | WBGene00011078 | |||||||
NDB | locus_tag | CELE_R07B1.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011078|UniProtKB=Q09420 | |||||||
family | PTHR21629 | ||||||||
NCBI | gene | 187647 | |||||||
RefSeq | protein | NM_077253.4 | |||||||
NR_160850.1 | |||||||||
SwissProt | UniProtAcc | Q09420 | |||||||
UniProt_GCRP | UniProtAcc | Q09420 | |||||||
RNAcentral | URSid | URS0000E60BDF | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (42) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOPX180 | ||||||||
CEOP2738 | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00011077 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012571 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WBGene00011877 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019306 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012570 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011079 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; arc ant V; hyp3; neurons; and socket cell based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including tryptophan; methylmercury hydroxide; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R07B1.6a | |||||||
Corresponding_transcript | R07B1.6b | ||||||||
R07B1.6a.1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00051415 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017505 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051416 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1155105 | ||||||||
Expr2005441 | |||||||||
Expr2023662 | |||||||||
Drives_construct | WBCnstr00030948 | ||||||||
Construct_product | WBCnstr00030948 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (109) | |||||||||
Interaction | WBInteraction000306215 | ||||||||
WBInteraction000348265 | |||||||||
WBInteraction000432804 | |||||||||
Map_info | Positive | Positive_clone | R07B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 1.73038 | |||||||
Method | Gene |