WormBase Tree Display for Gene: WBGene00010933
expand all nodes | collapse all nodes | view schema
| WBGene00010933 | SMap | S_parent | Sequence | M162 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | M162.7 | ||||||||
| Molecular_name | M162.7 | |||||||||
| M162.7.1 | ||||||||||
| CE47912 | ||||||||||
| Other_name | CELE_M162.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | M162.7 | |||||||||
| DB_info | Database | AceView | gene | 5U254 | ||||||
| WormQTL | gene | WBGene00010933 | ||||||||
| WormFlux | gene | WBGene00010933 | ||||||||
| NDB | locus_tag | CELE_M162.7 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00010933|UniProtKB=H2L2I7 | ||||||||
| family | PTHR32525 | |||||||||
| NCBI | gene | 187490 | ||||||||
| RefSeq | protein | NM_075437.5 | ||||||||
| TREEFAM | TREEFAM_ID | TF322345 | ||||||||
| TrEMBL | UniProtAcc | H2L2I7 | ||||||||
| UniProt_GCRP | UniProtAcc | H2L2I7 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 18 Jul 2008 16:56:31 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 17 Oct 2011 15:05:32 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (57) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00135166 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00132829 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00133021 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00184675 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| chrV_pilon.g17967 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||||
| Paralog (30) | ||||||||||
| Structured_description | Automated_description | Enriched in germ line based on proteomic and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; Zidovudine; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function WSN and Domain of unknown function. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | M162.7 | ||||||||
| Corresponding_CDS_history | M162.7:wp193 | |||||||||
| M162.7:wp229 | ||||||||||
| M162.7:wp234 | ||||||||||
| Corresponding_transcript | M162.7.1 | |||||||||
| Corresponding_pseudogene_history | M162.7:wp228 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017224 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00050984 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1154689 | |||||||||
| Expr2023470 | ||||||||||
| Microarray_results | SMD_M162.7 | |||||||||
| 177240_at | ||||||||||
| A_12_P105323 | ||||||||||
| Aff_M162.7 | ||||||||||
| GPL8304_CE_WBGene00010933_A | ||||||||||
| GPL8673_M162_7P00705 | ||||||||||
| GPL8673_M162_7P01075 | ||||||||||
| GPL8673_M162_7P01728 | ||||||||||
| Expression_cluster (119) | ||||||||||
| Interaction (18) | ||||||||||
| Map_info | Positive | Positive_clone | M162 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 23.4756 | ||||||||
| Method | Gene |
