WormBase Tree Display for Gene: WBGene00010713

WBGene00010713 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: uso-1 Person_evidence: WBPerson242
      Sequence_name: K09B11.9
      Molecular_name: K09B11.9a
        K09B11.9a.1
        CE38393
        K09B11.9b
        CE39750
        K09B11.9b.1
      Other_name: CELE_K09B11.9 Accession_evidence: NDB BX284604
      Public_name: uso-1
    DB_info: Database: AceView gene 4O210
        WormQTL gene WBGene00010713
        WormFlux gene WBGene00010713
        NDB locus_tag CELE_K09B11.9
        Panther gene CAEEL|WormBase=WBGene00010713|UniProtKB=G5EGG0
          family PTHR10013
        NCBI gene 178311
        RefSeq protein NM_001047508.3
            NM_001047509.2
        TREEFAM TREEFAM_ID TF106157
        TrEMBL UniProtAcc Q2EEM5
            G5EGG0
        UniProt_GCRP UniProtAcc G5EGG0
    Species: Caenorhabditis elegans
    History: Version_change (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: uso
    Allele (167)
    Component_of_genotype: WBGenotype00000041
    RNASeq_FPKM (74)
    GO_annotation (33)
    Ortholog (41)
    Structured_description: Concise_description: uso-1 encodes the C. elegans ortholog of the Uso1/p115 vesicle tethering protein that in yeast has been shown to function in endoplasmic reticulum-to-Golgi transport; RNAi screens indicate that uso-1 activity is required for normal fat content and distal tip cell migration. Paper_evidence: WBPaper00005655
            WBPaper00028783
          Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Nov 2008 00:00:00
      Automated_description: Predicted to be involved in intracellular protein transport; membrane fusion; and vesicle-mediated transport. Predicted to be located in ER to Golgi transport vesicle membrane; Golgi stack; and endoplasmic reticulum. Is an ortholog of human USO1 (USO1 vesicle transport factor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Modifies_disease: DOID:12377
  Modifies_disease_in_annotation: WBDOannot00000878
  Molecular_info: Corresponding_CDS: K09B11.9a
      K09B11.9b
    Corresponding_CDS_history: K09B11.9:wp141
    Corresponding_transcript: K09B11.9a.1
      K09B11.9b.1
    Other_sequence (26)
    Associated_feature: WBsf652344
      WBsf652345
      WBsf667687
      WBsf668492
      WBsf668493
      WBsf998406
      WBsf1018530
      WBsf1018531
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr1017142
      Expr1034688
      Expr1154081
      Expr2017933
      Expr2036069
    Microarray_results (22)
    Expression_cluster (88)
    Interaction (464)
  Map_info: Map: IV Position: 9.26696 Error: 0.011495
    Positive: Positive_clone: K09B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (8)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene