WormBase Tree Display for Gene: WBGene00010419
expand all nodes | collapse all nodes | view schema
WBGene00010419 | SMap | S_parent | Sequence | H28O16 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | atp-1 | Person_evidence | WBPerson237 | |||
Sequence_name | H28O16.1 | ||||||
Molecular_name | H28O16.1a | ||||||
H28O16.1a.1 | |||||||
CE18826 | |||||||
Other_name | phi-37 | Person_evidence | WBPerson2582 | ||||
CELE_H28O16.1 | Accession_evidence | NDB | BX284601 | ||||
Public_name | atp-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | atp | ||||||
Allele (62) | |||||||
Strain | WBStrain00003396 | ||||||
WBStrain00002785 | |||||||
WBStrain00003081 | |||||||
WBStrain00037556 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (27) | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00000229 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00004959 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00006921 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00013025 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | H28O16.1 encodes the C. elegans ortholog of the alpha subunit of mitochondrial ATP synthase. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 09 Jul 2014 00:00:00 | ||||||
Automated_description | Enables enterobactin binding activity. Involved in iron import into cell. Located in mitochondrion. Expressed in tail. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 22; mitochondrial complex V (ATP synthase) deficiency nuclear type 4 (multiple); and vascular dementia. Is an ortholog of human ATP5F1A (ATP synthase F1 subunit alpha). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||
DOID:8725 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||
DOID:0070462 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||
DOID:0070461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | ||||
Molecular_info | Corresponding_CDS | H28O16.1a | |||||
Corresponding_CDS_history | H28O16.1b:wp259 | ||||||
H28O16.1c:wp259 | |||||||
H28O16.1d:wp275 | |||||||
Corresponding_transcript | H28O16.1a.1 | ||||||
Other_sequence (534) | |||||||
Associated_feature (13) | |||||||
Experimental_info | RNAi_result (29) | ||||||
Expr_pattern (12) | |||||||
Drives_construct | WBCnstr00003312 | ||||||
WBCnstr00004575 | |||||||
WBCnstr00031428 | |||||||
Construct_product | WBCnstr00031428 | ||||||
Microarray_results (47) | |||||||
Expression_cluster (183) | |||||||
Interaction (263) | |||||||
Map_info | Map | I | Position | 13.879 | |||
Positive | Positive_clone | H28O16 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (17) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |