WormBase Tree Display for Gene: WBGene00010419
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WBGene00010419 | SMap | S_parent | Sequence | H28O16 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | atp | |||||
Allele (62) | ||||||
Strain | WBStrain00003396 | |||||
WBStrain00002785 | ||||||
WBStrain00003081 | ||||||
WBStrain00037556 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (27) | ||||||
Ortholog (37) | ||||||
Paralog | WBGene00000229 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00004959 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00006921 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00012040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00013025 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | H28O16.1 encodes the C. elegans ortholog of the alpha subunit of mitochondrial ATP synthase. | Curator_confirmed | WBPerson1843 | ||
Date_last_updated | 09 Jul 2014 00:00:00 | |||||
Automated_description | Enables enterobactin binding activity. Involved in iron import into cell. Located in mitochondrion. Expressed in tail. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 22; mitochondrial complex V (ATP synthase) deficiency nuclear type 4 (multiple); and vascular dementia. Is an ortholog of human ATP5F1A (ATP synthase F1 subunit alpha). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0111498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | |
DOID:8725 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | |||
DOID:0070462 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | |||
DOID:0070461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:823) | |||
Molecular_info | Corresponding_CDS | H28O16.1a | ||||
Corresponding_CDS_history | H28O16.1b:wp259 | |||||
H28O16.1c:wp259 | ||||||
H28O16.1d:wp275 | ||||||
Corresponding_transcript | H28O16.1a.1 | |||||
Other_sequence (534) | ||||||
Associated_feature (13) | ||||||
Experimental_info | RNAi_result (29) | |||||
Expr_pattern (12) | ||||||
Drives_construct | WBCnstr00003312 | |||||
WBCnstr00004575 | ||||||
WBCnstr00031428 | ||||||
Construct_product | WBCnstr00031428 | |||||
Microarray_results (47) | ||||||
Expression_cluster (183) | ||||||
Interaction (263) | ||||||
Map_info | Map | I | Position | 13.879 | ||
Positive | Positive_clone | H28O16 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference (17) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |