WormBase Tree Display for Gene: WBGene00010047
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| WBGene00010047 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D1.6 | |||||||
| Molecular_name | F54D1.6 | ||||||||
| F54D1.6.1 | |||||||||
| CE37523 | |||||||||
| Other_name | CELE_F54D1.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F54D1.6 | ||||||||
| DB_info | Database | AceView | gene | 4M59 | |||||
| WormQTL | gene | WBGene00010047 | |||||||
| WormFlux | gene | WBGene00010047 | |||||||
| NDB | locus_tag | CELE_F54D1.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010047|UniProtKB=Q20762 | |||||||
| family | PTHR23074 | ||||||||
| NCBI | gene | 178037 | |||||||
| RefSeq | protein | NM_069718.5 | |||||||
| SwissProt | UniProtAcc | Q20762 | |||||||
| TREEFAM | TREEFAM_ID | TF321321 | |||||||
| UniProt_GCRP | UniProtAcc | Q20762 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (67) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069062 | ||||||||
| 00069063 | |||||||||
| 00069064 | |||||||||
| 00117540 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00003183 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016045 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021334 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011175 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010540 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in cell-matrix adhesion. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D1.6 | |||||||
| Corresponding_CDS_history | F54D1.6:wp132 | ||||||||
| Corresponding_transcript | F54D1.6.1 | ||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf660694 | ||||||||
| WBsf660695 | |||||||||
| WBsf716792 | |||||||||
| WBsf717185 | |||||||||
| WBsf718195 | |||||||||
| WBsf997802 | |||||||||
| WBsf229126 | |||||||||
| WBsf229127 | |||||||||
| WBsf229128 | |||||||||
| WBsf229129 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr1028175 | ||||||||
| Expr1034379 | |||||||||
| Expr1152085 | |||||||||
| Expr2004132 | |||||||||
| Expr2022356 | |||||||||
| Drives_construct | WBCnstr00031710 | ||||||||
| Construct_product | WBCnstr00031710 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (267) | |||||||||
| Interaction | WBInteraction000366781 | ||||||||
| WBInteraction000377371 | |||||||||
| WBInteraction000393108 | |||||||||
| WBInteraction000450087 | |||||||||
| WBInteraction000455444 | |||||||||
| WBInteraction000457922 | |||||||||
| WBInteraction000551615 | |||||||||
| WBInteraction000553193 | |||||||||
| WBInteraction000576469 | |||||||||
| WBInteraction000580685 | |||||||||
| Map_info | Positive | Positive_clone | F54D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.94246 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061750 | |||||||||
| Method | Gene |
