WormBase Tree Display for Gene: WBGene00009926
expand all nodes | collapse all nodes | view schema
| WBGene00009926 | SMap | S_parent | Sequence | F52B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | noah-2 | Person_evidence | WBPerson545 | |||||
| WBPerson3379 | |||||||||
| Sequence_name | F52B11.3 | ||||||||
| Molecular_name | F52B11.3 | ||||||||
| F52B11.3.1 | |||||||||
| CE18723 | |||||||||
| Other_name | phi-55 | Person_evidence | WBPerson2582 | ||||||
| CELE_F52B11.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | noah-2 | ||||||||
| DB_info | Database | AceView | gene | 4O859 | |||||
| WormQTL | gene | WBGene00009926 | |||||||
| WormFlux | gene | WBGene00009926 | |||||||
| NDB | locus_tag | CELE_F52B11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009926|UniProtKB=Q9XUE5 | |||||||
| family | PTHR47327 | ||||||||
| NCBI | gene | 178365 | |||||||
| RefSeq | protein | NM_070298.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318269 | |||||||
| TrEMBL | UniProtAcc | Q9XUE5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUE5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-55 | ||||
| 3 | 28 Jul 2005 14:12:29 | WBPerson2970 | Name_change | CGC_name | noah-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | noah | ||||||||
| Allele (83) | |||||||||
| Strain | WBStrain00037396 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101710 | ||||||||
| 00101711 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Concise_description | noah-2 encodes a PAN and ZP domain-containing protein that is related to the Drosophila extracellular matrix component NompA (no-mechanoreceptor-potential A); loss of noah-2 function via RNAi indicates that NOAH-2 activity is essential for molting; in addition, NOAH-2 appears to be required for embryonic and larval development, reproduction, coordinated locomotion, and the overall health of the animal. | Paper_evidence (5) | ||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Nov 2007 00:00:00 | ||||||||
| Automated_description | Involved in molting cycle. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52B11.3 | |||||||
| Corresponding_transcript | F52B11.3.1 | ||||||||
| Other_sequence (300) | |||||||||
| Associated_feature (21) | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr14712 | ||||||||
| Expr14714 | |||||||||
| Expr1017601 | |||||||||
| Expr1034326 | |||||||||
| Expr1151745 | |||||||||
| Expr2014344 | |||||||||
| Expr2032585 | |||||||||
| Drives_construct | WBCnstr00031809 | ||||||||
| WBCnstr00040355 | |||||||||
| WBCnstr00041363 | |||||||||
| Construct_product | WBCnstr00031809 | ||||||||
| WBCnstr00040355 | |||||||||
| WBCnstr00041363 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (331) | |||||||||
| Interaction (132) | |||||||||
| Map_info | Map | IV | Position | 11.4204 | Error | 0.007885 | |||
| Positive | Positive_clone | F52B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (8) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
