WormBase Tree Display for Gene: WBGene00009462
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WBGene00009462 | SMap | S_parent | Sequence | F36D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sre-22 | Person_evidence | WBPerson522 | |||||
Sequence_name | F36D1.2 | ||||||||
Molecular_name | F36D1.2 | ||||||||
F36D1.2.1 | |||||||||
CE18663 | |||||||||
Other_name | CELE_F36D1.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | sre-22 | ||||||||
DB_info | Database | AceView | gene | 1L876 | |||||
WormQTL | gene | WBGene00009462 | |||||||
WormFlux | gene | WBGene00009462 | |||||||
NDB | locus_tag | CELE_F36D1.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009462|UniProtKB=Q9XV41 | |||||||
family | PTHR23128 | ||||||||
NCBI | gene | 185344 | |||||||
RefSeq | protein | NM_060496.2 | |||||||
TREEFAM | TREEFAM_ID | TF322673 | |||||||
TrEMBL | UniProtAcc | Q9XV41 | |||||||
UniProt_GCRP | UniProtAcc | Q9XV41 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-22 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sre | ||||||||
Allele (76) | |||||||||
Strain | WBStrain00003152 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00102246 | ||||||||
00102247 | |||||||||
00117123 | |||||||||
00117124 | |||||||||
Ortholog (18) | |||||||||
Paralog | WBGene00013957 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WBGene00013907 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
WBGene00010071 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00010220 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00016828 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00016833 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017371 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in URBL; URBR; and body wall musculature. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F36D1.2 | |||||||
Corresponding_transcript | F36D1.2.1 | ||||||||
Associated_feature | WBsf985250 | ||||||||
WBsf1010692 | |||||||||
Experimental_info | RNAi_result | WBRNAi00046462 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031839 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022350 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5967 | ||||||||
Expr14039 | |||||||||
Expr1018660 | |||||||||
Expr1150336 | |||||||||
Expr2034504 | |||||||||
Drives_construct | WBCnstr00003630 | ||||||||
WBCnstr00032164 | |||||||||
Construct_product | WBCnstr00032164 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (48) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | I | Position | 7.93465 | Error | 0.001489 | |||
Positive | Positive_clone | F36D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |