WormBase Tree Display for Gene: WBGene00009329
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| WBGene00009329 | SMap | S_parent | Sequence | F32D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F32D8.4 | |||||||
| Molecular_name | F32D8.4 | ||||||||
| F32D8.4.1 | |||||||||
| CE35182 | |||||||||
| Other_name | CELE_F32D8.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F32D8.4 | ||||||||
| DB_info | Database | AceView | gene | 5L370 | |||||
| WormQTL | gene | WBGene00009329 | |||||||
| WormFlux | gene | WBGene00009329 | |||||||
| NDB | locus_tag | CELE_F32D8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009329|UniProtKB=Q19965 | |||||||
| family | PTHR22997 | ||||||||
| NCBI | gene | 259646 | |||||||
| RefSeq | protein | NM_073374.8 | |||||||
| TREEFAM | TREEFAM_ID | TF324376 | |||||||
| TrEMBL | UniProtAcc | Q19965 | |||||||
| UniProt_GCRP | UniProtAcc | Q19965 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066483 | ||||||||
| 00066484 | |||||||||
| 00066485 | |||||||||
| 00066486 | |||||||||
| 00066487 | |||||||||
| Contained_in_operon | CEOP5266 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00000081 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009334 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010055 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | F32D8.4 is homologous to Yip1p, an essential Golgi membrane protein in S. cerevisiae that specifically binds the transport GTPases Ypt1p and Ypt31p, as well as Yop1p (the yeast homolog of human ADENOMATOUS POLYPOSIS COLI 1); F32D8.4 is also homologous to the Golgi membrane protein SB140 of H. sapiens, and contains a glutamine/asparagine-rich domain. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012868 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00013629 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in box C/D snoRNP assembly and rRNA processing. Predicted to be located in cytoplasm. Predicted to be part of R2TP complex and ribonucleoprotein complex. Is an ortholog of human PIH1D1 (PIH1 domain containing 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F32D8.4 | |||||||
| Corresponding_CDS_history | F32D8.4:wp87 | ||||||||
| F32D8.4:wp107 | |||||||||
| Corresponding_transcript | F32D8.4.1 | ||||||||
| Other_sequence | Oden_isotig20802 | ||||||||
| CJC05376_1 | |||||||||
| HC08144 | |||||||||
| HCC10810_1 | |||||||||
| CBC05197_1 | |||||||||
| Dviv_isotig31352 | |||||||||
| Associated_feature | WBsf234457 | ||||||||
| WBsf234458 | |||||||||
| WBsf234459 | |||||||||
| Experimental_info | Expr_pattern | Expr1013365 | |||||||
| Expr1034078 | |||||||||
| Expr1150024 | |||||||||
| Expr2003229 | |||||||||
| Expr2021441 | |||||||||
| Drives_construct | WBCnstr00032281 | ||||||||
| Construct_product | WBCnstr00032281 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (40) | |||||||||
| Interaction | WBInteraction000358283 | ||||||||
| WBInteraction000416990 | |||||||||
| WBInteraction000422152 | |||||||||
| WBInteraction000437736 | |||||||||
| WBInteraction000523080 | |||||||||
| Map_info | Positive | Positive_clone | F32D8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.82732 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
