WormBase Tree Display for Gene: WBGene00010055
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| WBGene00010055 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dhgd-1 | Person_evidence | WBPerson1997 | |||||
| WBPerson41219 | |||||||||
| Sequence_name | F54D5.12 | ||||||||
| Molecular_name | F54D5.12 | ||||||||
| F54D5.12.1 | |||||||||
| CE26814 | |||||||||
| F54D5.12.2 | |||||||||
| Other_name | CELE_F54D5.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dhgd-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | dhgd-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhgd | ||||||||
| Allele (211) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00015395 | ||||||||
| 00015396 | |||||||||
| 00117545 | |||||||||
| 00117546 | |||||||||
| Contained_in_operon | CEOP2556 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000081 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009329 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009334 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable catalytic activity and flavin adenine dinucleotide binding activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in D-2-hydroxyglutaric aciduria 1. Is an ortholog of human D2HGDH (D-2-hydroxyglutarate dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28358) | ||||
| Molecular_info | Corresponding_CDS | F54D5.12 | |||||||
| Corresponding_CDS_history | F54D5.12:wp42 | ||||||||
| Corresponding_transcript | F54D5.12.1 | ||||||||
| F54D5.12.2 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00094880 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048309 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032788 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020051 | ||||||||
| Expr1034386 | |||||||||
| Expr1152110 | |||||||||
| Expr2004148 | |||||||||
| Expr2022372 | |||||||||
| Regulate_expr_cluster | WBPaper00065272:dhgd-1(tm6671)_downregulated | ||||||||
| WBPaper00065272:dhgd-1(tm6671)_upregulated | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | II | Position | 3.74919 | |||||
| Positive | Positive_clone | F54D5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060111 | |||||||||
| WBPaper00063953 | |||||||||
| WBPaper00065272 | |||||||||
| Remark | [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (3.74151) | ||||||||
| Method | Gene |
