WormBase Tree Display for Gene: WBGene00000081
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| WBGene00000081 | SMap | S_parent | Sequence | Y50D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ads-1 | |||||||
| Sequence_name | Y50D7A.7 | ||||||||
| Molecular_name | Y50D7A.7 | ||||||||
| Y50D7A.7.1 | |||||||||
| CE26144 | |||||||||
| Other_name | ADHAPS | ||||||||
| Y50D7A.b | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y50D7A.j | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y50D7A.k | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D7A.7 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | ads-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ads | ||||||||
| Allele (133) | |||||||||
| Strain | WBStrain00001633 | ||||||||
| WBStrain00001634 | |||||||||
| WBStrain00004007 | |||||||||
| WBStrain00051414 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00009329 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009334 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010055 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | ads-1 is an ortholog of human AGPS (alkylglycerone phosphate synthase; OMIM:603051) that is required for the biosynthesis of ether lipids; mutation of human AGPS leads to type 3 rhizomelic chondrodysplasia punctata (OMIM:600121). | Paper_evidence | WBPaper00005418 | |||||
| WBPaper00048987 | |||||||||
| Person_evidence | WBPerson681 | ||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson324 | |||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 10 Feb 2016 00:00:00 | ||||||||
| Automated_description | Predicted to enable FAD binding activity and alkylglycerone-phosphate synthase activity. Predicted to be involved in ether lipid biosynthetic process. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata type 3. Is an ortholog of human AGPS (alkylglycerone phosphate synthase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110853 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:327) | ||||
| DOID:2580 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:327) | ||||||
| Molecular_info | Corresponding_CDS | Y50D7A.7 | |||||||
| Corresponding_transcript | Y50D7A.7.1 | ||||||||
| Other_sequence (80) | |||||||||
| Associated_feature | WBsf666512 | ||||||||
| WBsf1014040 | |||||||||
| WBsf226090 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057091 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030217 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001652 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram464 | ||||||||
| Expr7023 | |||||||||
| Expr7024 | |||||||||
| Expr1012500 | |||||||||
| Expr1030037 | |||||||||
| Expr1160540 | |||||||||
| Expr2009241 | |||||||||
| Expr2027478 | |||||||||
| Drives_construct | WBCnstr00002472 | ||||||||
| WBCnstr00002473 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (181) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | III | Position | -26.9029 | Error | 0.001546 | |||
| Positive | Positive_clone | Y50D7A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Sequence connection from [de Vet ECJ, Prinsen HCM, can den Bosch H], [020802 krb] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
