WormBase Tree Display for Gene: WBGene00009254
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| WBGene00009254 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | capg-1 | Paper_evidence | WBPaper00032450 | |||||
| Person_evidence | WBPerson421 | ||||||||
| Sequence_name | F29D11.2 | ||||||||
| Molecular_name | F29D11.2 | ||||||||
| F29D11.2.1 | |||||||||
| CE09790 | |||||||||
| Other_name | CELE_F29D11.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | capg-1 | ||||||||
| DB_info | Database | AceView | gene | 1I212 | |||||
| WormQTL | gene | WBGene00009254 | |||||||
| WormFlux | gene | WBGene00009254 | |||||||
| NDB | locus_tag | CELE_F29D11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009254|UniProtKB=G5EFJ4 | |||||||
| family | PTHR14418 | ||||||||
| NCBI | gene | 172521 | |||||||
| RefSeq | protein | NM_059727.6 | |||||||
| SwissProt | UniProtAcc | G5EFJ4 | |||||||
| TREEFAM | TREEFAM_ID | TF350408 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFJ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Jan 2009 15:24:44 | WBPerson2970 | Name_change | CGC_name | capg-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | capg | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00007139 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP1412 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Concise_description | capg-1 encodes the C. elegans homolog of human CAP-G, a subunit of the condensin I complex that functions to organize chromosomal structure and regulate chromosome segregation; immunoprecipitation experiments using C. elegans embryonic extracts demonstrate that CAPG-1 is a member of two distinct condensin I complexes, condensin I and condensin I-DC, that regulate meiotic and mitotic chromosome segregation and dosage compensation, respectively; immunofluorescence demonstrates that CAPG-1 localizes to meiotic and mitotic chromosomes in a pattern distinct from condensin II subunits and also to X chromosomes during hermaphrodite dosage compensation; CAPG-1 localization to the X chromosome is dependent upon the presence of other condensin I-DC members, such as DPY-26, DPY-27, and DPY-28. | Paper_evidence | WBPaper00032450 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 May 2009 00:00:00 | ||||||||
| Automated_description | Involved in embryo development; meiotic sister chromatid segregation; and mitotic sister chromatid segregation. Part of dosage compensation complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F29D11.2 | |||||||
| Corresponding_transcript | F29D11.2.1 | ||||||||
| Other_sequence | CRC04958_1 | ||||||||
| CR05688 | |||||||||
| Associated_feature | WBsf664463 | ||||||||
| WBsf664464 | |||||||||
| WBsf976801 | |||||||||
| WBsf976802 | |||||||||
| WBsf976803 | |||||||||
| WBsf219789 | |||||||||
| WBsf219790 | |||||||||
| Experimental_info | RNAi_result (27) | ||||||||
| Expr_pattern | Expr8708 | ||||||||
| Expr9851 | |||||||||
| Expr1022216 | |||||||||
| Expr1034035 | |||||||||
| Expr1149828 | |||||||||
| Expr2009718 | |||||||||
| Expr2027957 | |||||||||
| Drives_construct | WBCnstr00032340 | ||||||||
| Construct_product | WBCnstr00018331 | ||||||||
| WBCnstr00032340 | |||||||||
| Antibody | WBAntibody00001707 | ||||||||
| WBAntibody00001962 | |||||||||
| WBAntibody00002023 | |||||||||
| WBAntibody00002032 | |||||||||
| WBAntibody00002731 | |||||||||
| WBAntibody00002732 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (77) | |||||||||
| WBProcess | WBbiopr:00000099 | ||||||||
| Map_info | Map | I | Position | 2.21072 | Error | 0.00012 | |||
| Positive | Positive_clone | F29D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027924 | ||||||||
| WBPaper00028984 | |||||||||
| WBPaper00032230 | |||||||||
| WBPaper00032450 | |||||||||
| WBPaper00033766 | |||||||||
| WBPaper00034890 | |||||||||
| WBPaper00040306 | |||||||||
| WBPaper00047307 | |||||||||
| WBPaper00059616 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
