WormBase Tree Display for Gene: WBGene00009245
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WBGene00009245 | SMap | S_parent | Sequence | CHROMOSOME_II | |||
---|---|---|---|---|---|---|---|
Identity | Version | 4 | |||||
Name | CGC_name | rict-1 | Person_evidence | WBPerson7217 | |||
WBPerson545 | |||||||
Sequence_name | F29C12.3 | ||||||
Molecular_name | F29C12.3a | ||||||
F29C12.3a.1 | |||||||
CE43301 | |||||||
F29C12.3b | |||||||
CE45435 | |||||||
F29C12.3c | |||||||
CE45505 | |||||||
F29C12.3b.1 | |||||||
F29C12.3c.1 | |||||||
Other_name | lpo-6 | Paper_evidence | WBPaper00032966 | ||||
CELE_F29C12.3 | Accession_evidence | NDB | BX284602 | ||||
Public_name | rict-1 | ||||||
DB_info | Database | AceView | gene | 2N388 | |||
WormQTL | gene | WBGene00009245 | |||||
WormFlux | gene | WBGene00009245 | |||||
NDB | locus_tag | CELE_F29C12.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009245|UniProtKB=G5EFN2 | |||||
family | PTHR13298 | ||||||
NCBI | gene | 3565035 | |||||
RefSeq | protein | NM_001267449.3 | |||||
NM_001267447.2 | |||||||
NM_001267448.2 | |||||||
TREEFAM | TREEFAM_ID | TF343656 | |||||
TrEMBL | UniProtAcc | G5ED67 | |||||
G5EFN2 | |||||||
G5EFK2 | |||||||
UniProt_GCRP | UniProtAcc | G5EFN2 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (4) | ||||||
Acquires_merge | WBGene00009244 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rict | ||||||
Allele (535) | |||||||
Strain | WBStrain00023647 | ||||||
WBStrain00023655 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog (61) | |||||||
Structured_description | Concise_description | rict-1 enocdes the C. elegans ortholog of mammalian Rictor, a component of the target of rapamycin complex 2 (TORC2); in C. elegans, rict-1 activity is required for regulation of fat metabolism, feeding, growth, and life span; rict-1 has been reported to interact genetically with akt-1, akt-2, and sgk-1; a rict-1::RFP promoter fusion indicates that rict-1 is expressed in head neurons, the ventral nerve cord, the intestine, body wall muscle, pharynx, and spermatheca. | Paper_evidence | WBPaper00032936 | |||
WBPaper00032966 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Aug 2011 00:00:00 | ||||||
Automated_description | Predicted to enable protein serine/threonine kinase activator activity. Involved in mesendoderm development. Part of TORC2 complex. Expressed in several structures, including head neurons; intestine; pharynx; spermatheca; and ventral nerve cord. Human ortholog(s) of this gene implicated in breast ductal carcinoma; gastrointestinal system cancer (multiple); and lung disease (multiple). Is an ortholog of human RICTOR (RPTOR independent companion of MTOR complex 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (12) | ||||||
Molecular_info | Corresponding_CDS | F29C12.3a | |||||
F29C12.3b | |||||||
F29C12.3c | |||||||
Corresponding_CDS_history | F29C12.3:wp150 | ||||||
F29C12.3:wp196 | |||||||
Corresponding_transcript | F29C12.3a.1 | ||||||
F29C12.3b.1 | |||||||
F29C12.3c.1 | |||||||
Other_sequence (17) | |||||||
Associated_feature (20) | |||||||
Experimental_info | RNAi_result (17) | ||||||
Expr_pattern | Expr8566 | ||||||
Expr8569 | |||||||
Expr1021765 | |||||||
Expr1034033 | |||||||
Expr1149811 | |||||||
Expr2015350 | |||||||
Expr2033584 | |||||||
Drives_construct | WBCnstr00005615 | ||||||
WBCnstr00013366 | |||||||
WBCnstr00013367 | |||||||
Construct_product (12) | |||||||
Microarray_results (30) | |||||||
Expression_cluster (136) | |||||||
Interaction (32) | |||||||
WBProcess | WBbiopr:00000001 | ||||||
Map_info | Map | II | Position | 14.309 | Error | 0.044756 | |
Positive | Positive_clone | F29C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (39) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |