WormBase Tree Display for Gene: WBGene00009215
expand all nodes | collapse all nodes | view schema
WBGene00009215 | SMap | S_parent | Sequence | F28D1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | thn-2 | |||||
Sequence_name | F28D1.5 | ||||||
Molecular_name | F28D1.5 | ||||||
F28D1.5.1 | |||||||
CE05745 | |||||||
Other_name | CELE_F28D1.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | thn-2 | ||||||
DB_info | Database (10) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | thn | ||||||
Allele (28) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00066203 | ||||||
00066204 | |||||||
00066205 | |||||||
00066206 | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00009213 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009214 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WBGene00021999 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009858 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021992 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium and defense response to Gram-positive bacterium. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F28D1.5 | |||||
Corresponding_transcript | F28D1.5.1 | ||||||
Other_sequence | CBC01692_1 | ||||||
MC00876 | |||||||
MCC01395_1 | |||||||
CR01128 | |||||||
CJC02222_2 | |||||||
CRC11906_1 | |||||||
CJC00255_1 | |||||||
Associated_feature | WBsf229285 | ||||||
Experimental_info | RNAi_result | WBRNAi00094542 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045830 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078263 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070075 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014049 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031527 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00075934 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094567 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078264 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094552 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1149737 | ||||||
Expr2017386 | |||||||
Expr2035523 | |||||||
Drives_construct | WBCnstr00032364 | ||||||
Construct_product | WBCnstr00032364 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (336) | |||||||
Interaction (209) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | IV | Position | 5.8945 | Error | 0.002435 | |
Positive | Positive_clone | F28D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027722 | ||||||
WBPaper00028482 | |||||||
WBPaper00032276 | |||||||
WBPaper00036653 | |||||||
WBPaper00041339 | |||||||
WBPaper00042178 | |||||||
WBPaper00042367 | |||||||
WBPaper00064229 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |