WormBase Tree Display for Gene: WBGene00009006
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WBGene00009006 | SMap | S_parent | Sequence | F21D5 | ||
---|---|---|---|---|---|---|
Identity | Version | 2 | ||||
Name (5) | ||||||
DB_info | Database (13) | |||||
Species | Caenorhabditis elegans | |||||
History | Version_change (2) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pgm | |||||
Allele (38) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (14) | ||||||
Contained_in_operon | CEOP4300 | |||||
Ortholog (46) | ||||||
Paralog | WBGene00012803 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00013690 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00019890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | F21D5.1 encodes a putative phosphoacetylglucosamine mutase orthologousto human PGM3 (OMIM:172100); F21D5.1 is thought to catalyse the thirdstep of the hexosamine pathway to UDP-N-acetylglucosamine orUDP-N-acetylgalactosamine; F21D5.1 transcripts are enriched duringoogenesis; F21D5.1(RNAi) animals have an osmotically-sensitive embryoniclethal phenotype, presumably because of defects in chitin and eggshellsynthesis. | Paper_evidence | WBPaper00006390 | ||
WBPaper00025054 | ||||||
WBPaper00028588 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 07 Apr 2007 00:00:00 | |||||
Automated_description | Predicted to enable phosphoacetylglucosamine mutase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Human ortholog(s) of this gene implicated in cervical cancer; immunodeficiency 23; and teratoma. Is an ortholog of human PGM3 (phosphoglucomutase 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0111953 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8907) | |
DOID:3307 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8907) | |||
DOID:4362 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8907) | |||
Molecular_info | Corresponding_CDS | F21D5.1 | ||||
Corresponding_transcript | F21D5.1.1 | |||||
Other_sequence (40) | ||||||
Associated_feature | WBsf646186 | |||||
WBsf228731 | ||||||
WBsf228732 | ||||||
WBsf228733 | ||||||
Experimental_info | RNAi_result | WBRNAi00008674 | Inferred_automatically | RNAi_primary | ||
WBRNAi00025164 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00085828 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00045190 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00031215 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1024271 | |||||
Expr1033921 | ||||||
Expr1149130 | ||||||
Expr2002821 | ||||||
Expr2021038 | ||||||
Drives_construct | WBCnstr00032531 | |||||
Construct_product | WBCnstr00032531 | |||||
Microarray_results (19) | ||||||
Expression_cluster (155) | ||||||
Interaction (279) | ||||||
Map_info | Positive | Positive_clone | F21D5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 3.95739 | ||||
Reference | WBPaper00029024 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
WBPaper00057849 | ||||||
Method | Gene |