WormBase Tree Display for Gene: WBGene00008998
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| WBGene00008998 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ncs-4 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F21A10.1 | ||||||||
| Molecular_name | F21A10.1a | ||||||||
| F21A10.1a.1 | |||||||||
| CE43156 | |||||||||
| F21A10.1b | |||||||||
| CE41315 | |||||||||
| F21A10.1c | |||||||||
| CE47975 | |||||||||
| F21A10.1b.1 | |||||||||
| F21A10.1b.2 | |||||||||
| F21A10.1c.1 | |||||||||
| Other_name | CELE_F21A10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ncs-4 | ||||||||
| DB_info | Database | AceView | gene | XK795 | |||||
| WormQTL | gene | WBGene00008998 | |||||||
| WormFlux | gene | WBGene00008998 | |||||||
| NDB | locus_tag | CELE_F21A10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008998|UniProtKB=G5EGM2 | |||||||
| family | PTHR23055 | ||||||||
| NCBI | gene | 184757 | |||||||
| RefSeq | protein | NM_077307.6 | |||||||
| NM_001381078.1 | |||||||||
| NM_001381077.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF318560 | |||||||
| TrEMBL | UniProtAcc | G5EGM2 | |||||||
| K8ES99 | |||||||||
| A6PVB9 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EGM2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | ncs-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncs | ||||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005010 | ||||||||
| 00116794 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00003563 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003564 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015867 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021116 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007710 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Expressed in body wall musculature; diagonal muscle; head neurons; tail neurons; and vulval muscle. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F21A10.1a | |||||||
| F21A10.1b | |||||||||
| F21A10.1c | |||||||||
| Corresponding_CDS_history | F21A10.1a:wp196 | ||||||||
| Corresponding_transcript | F21A10.1a.1 | ||||||||
| F21A10.1b.1 | |||||||||
| F21A10.1b.2 | |||||||||
| F21A10.1c.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf648453 | ||||||||
| WBsf648454 | |||||||||
| WBsf236255 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013648 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045154 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031193 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12199 | ||||||||
| Expr1012001 | |||||||||
| Expr1149094 | |||||||||
| Expr2013913 | |||||||||
| Expr2032153 | |||||||||
| Drives_construct | WBCnstr00020399 | ||||||||
| WBCnstr00032537 | |||||||||
| Construct_product | WBCnstr00020399 | ||||||||
| WBCnstr00032537 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction | WBInteraction000184971 | ||||||||
| WBInteraction000540718 | |||||||||
| WBInteraction000556319 | |||||||||
| WBInteraction000556320 | |||||||||
| Map_info | Map | X | Position | 1.87003 | |||||
| Positive | Positive_clone | F21A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046422 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
