WormBase Tree Display for Gene: WBGene00007942
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| WBGene00007942 | SMap | S_parent | Sequence | C34F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idh-2 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C34F6.8 | ||||||||
| Molecular_name | C34F6.8 | ||||||||
| C34F6.8.1 | |||||||||
| CE15677 | |||||||||
| Other_name | CELE_C34F6.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | idh-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Oct 2008 10:23:18 | WBPerson2970 | Name_change | CGC_name | idh-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idh | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00033023 | ||||||||
| WBStrain00033024 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00010317 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | idh-2 encodes a predicted mitochondrial isocitrate dehydrogenase; by homology, IDH-2 is predicted to catalyze the formation of alpha-ketoglutarate from isocitrate as part of the citric acid cycle. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 26 Oct 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable isocitrate dehydrogenase (NADP+) activity. Predicted to be involved in NADP metabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in several diseases, including D-2-hydroxyglutaric aciduria 2; gastrointestinal system cancer (multiple); and lung non-small cell carcinoma (multiple). Is an ortholog of human IDH2 (isocitrate dehydrogenase (NADP(+)) 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (11) | ||||||||
| Molecular_info | Corresponding_CDS | C34F6.8 | |||||||
| Corresponding_transcript | C34F6.8.1 | ||||||||
| Other_sequence (83) | |||||||||
| Associated_feature | WBsf648525 | ||||||||
| WBsf648526 | |||||||||
| WBsf655211 | |||||||||
| WBsf1006935 | |||||||||
| WBsf236360 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029550 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000895 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011628 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041925 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021924 | ||||||||
| Expr1033448 | |||||||||
| Expr1145932 | |||||||||
| Expr2012670 | |||||||||
| Expr2030906 | |||||||||
| Drives_construct | WBCnstr00033366 | ||||||||
| Construct_product | WBCnstr00033366 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | X | Position | 2.86353 | Error | 0.000584 | |||
| Positive | Positive_clone | C34F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027145 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051770 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059575 | |||||||||
| WBPaper00064707 | |||||||||
| WBPaper00065625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
