WormBase Tree Display for Gene: WBGene00007848
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WBGene00007848 | SMap | S_parent | Sequence | C31E10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | cytb | |||||
Allele (24) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00085658 | |||||
00085659 | ||||||
00085660 | ||||||
00085661 | ||||||
00085662 | ||||||
00085663 | ||||||
00085664 | ||||||
00085665 | ||||||
Ortholog (48) | ||||||
Paralog | WBGene00010235 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00014300 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00020931 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Concise_description | cytb-5.1 encodes a protein orthologous to cytochrome b5; a CYTB-5.1 reporter fusion protein, when expressed in the distal tip cell, exhibits perinuclear localization, consistent with localization to the endoplasmic reticulum. | Paper_evidence | WBPaper00040883 | ||
Curator_confirmed | WBPerson1843 | |||||
WBPerson1823 | ||||||
WBPerson567 | ||||||
Date_last_updated | 16 Mar 2012 00:00:00 | |||||
Automated_description | Predicted to enable heme binding activity. Located in perinuclear region of cytoplasm. Used to study hematopoietic system disease. Human ortholog(s) of this gene implicated in methemoglobinemia; methemoglobinemia and ambiguous genitalia; and stomatitis. Is an ortholog of human CYB5A (cytochrome b5 type A) and CYB5B (cytochrome b5 type B). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Experimental_model | DOID:74 | Homo sapiens | Paper_evidence | WBPaper00053474 | |
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 09 May 2023 00:00:00 | |||||
Potential_model | DOID:0112316 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||
DOID:10783 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | |||
DOID:9637 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | |||
Models_disease_in_annotation | WBDOannot00000049 | |||||
Molecular_info | Corresponding_CDS | C31E10.7 | ||||
Corresponding_CDS_history | C31E10.7:wp132 | |||||
Corresponding_transcript | C31E10.7.1 | |||||
Other_sequence (80) | ||||||
Associated_feature | WBsf648705 | |||||
WBsf655229 | ||||||
WBsf663528 | ||||||
WBsf1007797 | ||||||
WBsf1024340 | ||||||
WBsf236630 | ||||||
WBsf236631 | ||||||
WBsf236632 | ||||||
Experimental_info (7) | ||||||
Map_info | Map | X | Position | 15.9609 | ||
Positive | Positive_clone | C31E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00034497 | |||||
WBPaper00034498 | ||||||
WBPaper00038491 | ||||||
WBPaper00040883 | ||||||
WBPaper00053474 | ||||||
WBPaper00055090 | ||||||
WBPaper00060223 | ||||||
WBPaper00061328 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |