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WormBase Tree Display for Gene: WBGene00007761

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Name Class

WBGene00007761SMapS_parentSequenceC27B7
IdentityVersion3
NameCGC_namerad-54.L2Author_evidenceWBPerson555
Sequence_nameC27B7.4
Molecular_nameC27B7.4a
C27B7.4a.1
CE17477
C27B7.4b
CE52741
C27B7.4b.1
C27B7.4b.2
Other_namerad-26Author_evidenceWBPerson555
CELE_C27B7.4Accession_evidenceNDBBX284604
Public_namerad-54.L2
DB_infoDatabaseAceViewgene4J665
WormQTLgeneWBGene00007761
WormFluxgeneWBGene00007761
NDBlocus_tagCELE_C27B7.4
PanthergeneCAEEL|WormBase=WBGene00007761|UniProtKB=Q18241
familyPTHR45797
NCBIgene177706
RefSeqproteinNM_001380389.2
NM_069144.7
TrEMBLUniProtAccQ18241
A0A3B1E4Z6
UniProt_GCRPUniProtAccQ18241
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Sep 2006 10:43:24WBPerson1847Name_changeCGC_namerad-26
310 Jul 2023 23:47:10WBPerson51134Name_changeCGC_namerad-54.L2
Other_namerad-26
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrad
Allele (99)
Possibly_affected_byWBVar02158613
RNASeq_FPKM (74)
GO_annotation (19)
Ortholog (39)
Paralog (19)
Structured_descriptionAutomated_descriptionEnables RNA polymerase II-specific DNA-binding transcription factor binding activity and SUMO binding activity. Involved in negative regulation of vulval development. Predicted to be located in nucleus. Predicted to be part of NuRD complex. Is an ortholog of human RAD54L2 (RAD54 like 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC27B7.4a
C27B7.4b
Corresponding_transcriptC27B7.4a.1
C27B7.4b.1
C27B7.4b.2
Other_sequence (12)
Associated_featureWBsf646196
WBsf978740
WBsf997304
WBsf997305
WBsf228760
WBsf228761
Transcription_factorWBTranscriptionFactor000807
Experimental_infoRNAi_resultWBRNAi00081596Inferred_automaticallyRNAi_primary
WBRNAi00113438Inferred_automaticallyRNAi_primary
WBRNAi00007783Inferred_automaticallyRNAi_primary
WBRNAi00011242Inferred_automaticallyRNAi_primary
WBRNAi00077944Inferred_automaticallyRNAi_primary
WBRNAi00075555Inferred_automaticallyRNAi_primary
WBRNAi00041317Inferred_automaticallyRNAi_primary
Expr_patternExpr10424
Expr16386
Expr1026354
Expr1033361
Expr1145361
Expr2015239
Expr2033473
Drives_constructWBCnstr00015319
WBCnstr00033501
Construct_productWBCnstr00033501
WBCnstr00042987
Microarray_results (23)
Expression_cluster (121)
SAGE_tag (22)
Interaction (357)
WBProcessWBbiopr:00000020
WBbiopr:00000024
Map_infoMapIVPosition3.9997Error2.1e-05
PositivePositive_cloneC27B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026067
WBPaper00038491
WBPaper00046298
WBPaper00055090
WBPaper00064708
PictureWBPicture0000013092
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene