WormBase Tree Display for Gene: WBGene00007656
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WBGene00007656 | SMap | S_parent | Sequence | C17H1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pals-2 | Person_evidence | WBPerson260 | |||||
Sequence_name | C17H1.3 | ||||||||
Molecular_name | C17H1.3 | ||||||||
WP:CE15625 | |||||||||
CE15625 | |||||||||
C17H1.3.1 | |||||||||
Other_name | CELE_C17H1.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | pals-2 | ||||||||
DB_info | Database | AceView | gene | 1N691 | |||||
WormQTL | gene | WBGene00007656 | |||||||
WormFlux | gene | WBGene00007656 | |||||||
NDB | locus_tag | CELE_C17H1.3 | |||||||
NCBI | gene | 182746 | |||||||
RefSeq | mRNA | NM_060894.1 | |||||||
protein | NP_493295.1 | ||||||||
NM_060894.3 | |||||||||
TREEFAM | TREEFAM_ID | TF322878 | |||||||
UniProt | UniProtAcc | O45254 | |||||||
TrEMBL | UniProtAcc | O45254 | |||||||
UniProt_GCRP | UniProtAcc | O45254 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pals | ||||||||
Allele (90) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (2) | |||||||||
Paralog | WBGene00009061 | Caenorhabditis elegans | From_analysis (2) | ||||||
WBGene00007662 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00007658 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00013294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00016281 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044237 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044711 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Expressed in hypodermis and neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C17H1.3 | |||||||
Corresponding_transcript | C17H1.3.1 | ||||||||
Associated_feature | WBsf985775 | ||||||||
Experimental_info | RNAi_result | WBRNAi00029026 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040846 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (4) | |||||||||
Drives_construct | WBCnstr00033576 | ||||||||
Construct_product | WBCnstr00033576 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (152) | |||||||||
Interaction | WBInteraction000143559 | ||||||||
WBInteraction000152198 | |||||||||
WBInteraction000196284 | |||||||||
WBInteraction000227090 | |||||||||
WBInteraction000341673 | |||||||||
WBInteraction000356563 | |||||||||
WBInteraction000356755 | |||||||||
WBInteraction000423477 | |||||||||
WBInteraction000430412 | |||||||||
WBInteraction000458601 | |||||||||
Map_info | Map | I | Position | 17.219 | |||||
Positive | Positive_clone | C17H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |