WormBase Tree Display for Gene: WBGene00007576
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| WBGene00007576 | SMap | S_parent | Sequence | C14B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dph-1 | Person_evidence | WBPerson1847 | |||||
| Sequence_name | C14B1.5 | ||||||||
| Molecular_name | C14B1.5 | ||||||||
| C14B1.5.1 | |||||||||
| CE17401 | |||||||||
| Other_name | CELE_C14B1.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dph-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Jan 2009 14:01:14 | WBPerson2970 | Name_change | CGC_name | dph-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dph | ||||||||
| Allele (43) | |||||||||
| Strain | WBStrain00035549 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP3136 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00007488 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dph-1 encodes an ortholog of S. cerevisiae YIL103 and human DPH2L1/OVCA1 (OMIM:603527, deleted or downregulated in ovarian tumors); DPH-1 is paralogous to S. cerevisiae DPH2/YKL191W, a protein component of diphtamide synthesis. | Paper_evidence (11) | ||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 14 Dec 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable 4 iron, 4 sulfur cluster binding activity. Predicted to contribute to 2-(3-amino-3-carboxypropyl)histidine synthase activity. Predicted to be involved in protein histidyl modification to diphthamide. Predicted to be located in protein-containing complex. Is an ortholog of human DPH1 (diphthamide biosynthesis 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070477 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3003) | ||||
| Molecular_info | Corresponding_CDS | C14B1.5 | |||||||
| Corresponding_transcript | C14B1.5.1 | ||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf658766 | ||||||||
| WBsf991876 | |||||||||
| WBsf1014618 | |||||||||
| WBsf224643 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00111886 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040493 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028874 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010724 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006009 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00068044 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106832 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018672 | ||||||||
| Expr1033259 | |||||||||
| Expr1144561 | |||||||||
| Expr2011047 | |||||||||
| Expr2029284 | |||||||||
| Drives_construct | WBCnstr00033638 | ||||||||
| Construct_product | WBCnstr00033638 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | III | Position | -4.44099 | Error | 0.038633 | |||
| Positive | Positive_clone | C14B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
